Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC4.65□□□□□ -1.67
CX3CL1P78423 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC4.65□□□□□ -1.67
CX3CL1P78423 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC4.65□□□□□ -1.67
CX3CL1P78423 TEX41-206ENST00000432608 661 ntTSL 3 BASIC4.65□□□□□ -1.67
CX3CL1P78423 DEFA9P-201ENST00000433042 285 ntBASIC4.65□□□□□ -1.67
CX3CL1P78423 TRAPPC13P1-201ENST00000435991 1062 ntBASIC4.65□□□□□ -1.67
CX3CL1P78423 MTND2P40-201ENST00000436718 841 ntBASIC4.65□□□□□ -1.67
CX3CL1P78423 RPL5P25-201ENST00000441148 775 ntBASIC4.65□□□□□ -1.67
CX3CL1P78423 AL512605.1-202ENST00000441919 381 ntBASIC4.65□□□□□ -1.67
CX3CL1P78423 AL359955.2-201ENST00000445380 353 ntBASIC4.65□□□□□ -1.67
CX3CL1P78423 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CX3CL1P78423 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CX3CL1P78423 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC4.65□□□□□ -1.67
CX3CL1P78423 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC4.65□□□□□ -1.67
CX3CL1P78423 AC008379.1-201ENST00000463655 464 ntBASIC4.65□□□□□ -1.67
CX3CL1P78423 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CX3CL1P78423 AC073610.1-201ENST00000489971 396 ntBASIC4.65□□□□□ -1.67
CX3CL1P78423 AC093801.2-201ENST00000503966 1050 ntBASIC4.65□□□□□ -1.67
CX3CL1P78423 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC4.65□□□□□ -1.67
CX3CL1P78423 GAPDHP71-201ENST00000511530 1003 ntBASIC4.65□□□□□ -1.67
CX3CL1P78423 RFESD-208ENST00000513950 464 ntTSL 5 BASIC4.65□□□□□ -1.67
CX3CL1P78423 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC4.65□□□□□ -1.67
CX3CL1P78423 AC078899.1-201ENST00000521432 1185 ntBASIC4.65□□□□□ -1.67
CX3CL1P78423 IGKV2-4-201ENST00000523070 340 ntBASIC4.65□□□□□ -1.67
CX3CL1P78423 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC4.65□□□□□ -1.67
CX3CL1P78423 TOMM20P1-201ENST00000534518 427 ntBASIC4.65□□□□□ -1.67
CX3CL1P78423 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CX3CL1P78423 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC4.65□□□□□ -1.67
CX3CL1P78423 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC4.65□□□□□ -1.67
CX3CL1P78423 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC4.65□□□□□ -1.67
CX3CL1P78423 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC4.65□□□□□ -1.67
CX3CL1P78423 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC4.65□□□□□ -1.67
CX3CL1P78423 AC090826.1-203ENST00000569235 490 ntBASIC4.65□□□□□ -1.67
CX3CL1P78423 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC4.65□□□□□ -1.67
CX3CL1P78423 AC097504.2-201ENST00000608088 454 ntBASIC4.65□□□□□ -1.67
CX3CL1P78423 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC4.65□□□□□ -1.67
CX3CL1P78423 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC4.65□□□□□ -1.67
CX3CL1P78423 AL359513.1-201ENST00000614364 557 ntBASIC4.65□□□□□ -1.67
CX3CL1P78423 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC4.65□□□□□ -1.67
CX3CL1P78423 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC4.65□□□□□ -1.67
CX3CL1P78423 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC4.65□□□□□ -1.67
CX3CL1P78423 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC4.65□□□□□ -1.67
CX3CL1P78423 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC4.65□□□□□ -1.67
CX3CL1P78423 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC4.65□□□□□ -1.67
CX3CL1P78423 OR11H2-202ENST00000641517 1085 ntBASIC4.65□□□□□ -1.67
CX3CL1P78423 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC4.65□□□□□ -1.67
CX3CL1P78423 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC4.65□□□□□ -1.67
CX3CL1P78423 AC015689.2-201ENST00000528172 1738 ntBASIC4.65□□□□□ -1.67
CX3CL1P78423 AL034546.1-201ENST00000623740 3693 ntBASIC4.65□□□□□ -1.67
CX3CL1P78423 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CX3CL1P78423 AC009962.1-201ENST00000567327 3813 ntBASIC4.65□□□□□ -1.67
CX3CL1P78423 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
CX3CL1P78423 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
CX3CL1P78423 NEPNP-201ENST00000404786 1371 ntBASIC4.65□□□□□ -1.67
CX3CL1P78423 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC4.65□□□□□ -1.67
CX3CL1P78423 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC4.64□□□□□ -1.67
CX3CL1P78423 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CX3CL1P78423 AC010266.2-201ENST00000564741 3255 ntBASIC4.64□□□□□ -1.67
CX3CL1P78423 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CX3CL1P78423 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
CX3CL1P78423 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC4.64□□□□□ -1.67
CX3CL1P78423 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC4.64□□□□□ -1.67
CX3CL1P78423 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC4.64□□□□□ -1.67
CX3CL1P78423 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
CX3CL1P78423 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CX3CL1P78423 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC4.64□□□□□ -1.67
CX3CL1P78423 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CX3CL1P78423 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC4.64□□□□□ -1.67
CX3CL1P78423 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC4.64□□□□□ -1.67
CX3CL1P78423 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CX3CL1P78423 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CX3CL1P78423 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CX3CL1P78423 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CX3CL1P78423 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CX3CL1P78423 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC4.64□□□□□ -1.67
CX3CL1P78423 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CX3CL1P78423 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
CX3CL1P78423 RNA5SP273-201ENST00000362484 113 ntBASIC4.64□□□□□ -1.67
CX3CL1P78423 RNA5SP477-201ENST00000362639 119 ntBASIC4.64□□□□□ -1.67
CX3CL1P78423 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
CX3CL1P78423 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC4.64□□□□□ -1.67
CX3CL1P78423 OR7E156P-201ENST00000400303 464 ntBASIC4.64□□□□□ -1.67
CX3CL1P78423 RSL24D1P1-201ENST00000404972 493 ntBASIC4.64□□□□□ -1.67
CX3CL1P78423 SNORA79B-201ENST00000410557 148 ntBASIC4.64□□□□□ -1.67
CX3CL1P78423 AL354890.1-201ENST00000413730 346 ntBASIC4.64□□□□□ -1.67
CX3CL1P78423 AL445183.3-201ENST00000414168 502 ntBASIC4.64□□□□□ -1.67
CX3CL1P78423 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC4.64□□□□□ -1.67
CX3CL1P78423 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC4.64□□□□□ -1.67
CX3CL1P78423 VN1R37P-201ENST00000419096 748 ntBASIC4.64□□□□□ -1.67
CX3CL1P78423 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC4.64□□□□□ -1.67
CX3CL1P78423 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC4.64□□□□□ -1.67
CX3CL1P78423 AC115283.1-201ENST00000427353 400 ntBASIC4.64□□□□□ -1.67
CX3CL1P78423 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC4.64□□□□□ -1.67
CX3CL1P78423 FGF12-202ENST00000430714 603 ntTSL 2 BASIC4.64□□□□□ -1.67
CX3CL1P78423 MTCO1P43-201ENST00000431831 488 ntBASIC4.64□□□□□ -1.67
CX3CL1P78423 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC4.64□□□□□ -1.67
CX3CL1P78423 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC4.64□□□□□ -1.67
CX3CL1P78423 AC096775.1-201ENST00000437724 448 ntBASIC4.64□□□□□ -1.67
CX3CL1P78423 AC006994.1-201ENST00000438212 839 ntBASIC4.64□□□□□ -1.67
CX3CL1P78423 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms