Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 RNA5SP296-201ENST00000410523 111 ntBASIC5.78□□□□□ -1.48
TPM4P67936 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC5.78□□□□□ -1.48
TPM4P67936 COX6CP13-201ENST00000428703 226 ntBASIC5.78□□□□□ -1.48
TPM4P67936 FTLP19-201ENST00000433300 394 ntBASIC5.78□□□□□ -1.48
TPM4P67936 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC5.78□□□□□ -1.48
TPM4P67936 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC5.78□□□□□ -1.48
TPM4P67936 AC004980.3-201ENST00000447046 365 ntBASIC5.78□□□□□ -1.48
TPM4P67936 AL031584.1-201ENST00000447169 754 ntBASIC5.78□□□□□ -1.48
TPM4P67936 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
TPM4P67936 AC108161.1-201ENST00000461060 402 ntBASIC5.78□□□□□ -1.48
TPM4P67936 AC104339.1-201ENST00000465478 348 ntBASIC5.78□□□□□ -1.48
TPM4P67936 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
TPM4P67936 AC073073.1-201ENST00000493920 463 ntBASIC5.78□□□□□ -1.48
TPM4P67936 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC5.78□□□□□ -1.48
TPM4P67936 AC021733.2-201ENST00000518830 497 ntBASIC5.78□□□□□ -1.48
TPM4P67936 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC5.78□□□□□ -1.48
TPM4P67936 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC5.78□□□□□ -1.48
TPM4P67936 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC5.78□□□□□ -1.48
TPM4P67936 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC5.78□□□□□ -1.48
TPM4P67936 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC5.78□□□□□ -1.48
TPM4P67936 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC5.78□□□□□ -1.48
TPM4P67936 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC5.78□□□□□ -1.48
TPM4P67936 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.78□□□□□ -1.48
TPM4P67936 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC5.78□□□□□ -1.48
TPM4P67936 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.78□□□□□ -1.48
TPM4P67936 AC008814.1-201ENST00000603797 406 ntBASIC5.78□□□□□ -1.48
TPM4P67936 FO681491.1-202ENST00000623392 737 ntBASIC5.78□□□□□ -1.48
TPM4P67936 MTCO1P1-201ENST00000624263 1081 ntBASIC5.78□□□□□ -1.48
TPM4P67936 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
TPM4P67936 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC5.78□□□□□ -1.48
TPM4P67936 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC5.78□□□□□ -1.48
TPM4P67936 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC5.78□□□□□ -1.48
TPM4P67936 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC5.78□□□□□ -1.48
TPM4P67936 CASC19-221ENST00000641309 1382 ntBASIC5.78□□□□□ -1.48
TPM4P67936 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.78□□□□□ -1.48
TPM4P67936 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
TPM4P67936 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
TPM4P67936 AC126323.6-202ENST00000568092 3511 ntBASIC5.78□□□□□ -1.48
TPM4P67936 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
TPM4P67936 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
TPM4P67936 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
TPM4P67936 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.77□□□□□ -1.49
TPM4P67936 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
TPM4P67936 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
TPM4P67936 OR52B3P-201ENST00000314715 928 ntBASIC5.77□□□□□ -1.49
TPM4P67936 PRUNEP1-201ENST00000425846 705 ntBASIC5.77□□□□□ -1.49
TPM4P67936 FMO7P-201ENST00000436045 768 ntBASIC5.77□□□□□ -1.49
TPM4P67936 EEF1B2P6-201ENST00000445713 673 ntBASIC5.77□□□□□ -1.49
TPM4P67936 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
TPM4P67936 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
TPM4P67936 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC5.77□□□□□ -1.49
TPM4P67936 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC5.77□□□□□ -1.49
TPM4P67936 AC011853.1-201ENST00000518911 454 ntBASIC5.77□□□□□ -1.49
TPM4P67936 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.77□□□□□ -1.49
TPM4P67936 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC5.77□□□□□ -1.49
TPM4P67936 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC5.77□□□□□ -1.49
TPM4P67936 AGGF1P9-201ENST00000561884 913 ntBASIC5.77□□□□□ -1.49
TPM4P67936 CCDC58P1-201ENST00000578567 430 ntBASIC5.77□□□□□ -1.49
TPM4P67936 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
TPM4P67936 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
TPM4P67936 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
TPM4P67936 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
TPM4P67936 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
TPM4P67936 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.77□□□□□ -1.49
TPM4P67936 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC5.77□□□□□ -1.49
TPM4P67936 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
TPM4P67936 C2CD6-201ENST00000286195 2104 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
TPM4P67936 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.77□□□□□ -1.49
TPM4P67936 DDX18P6-201ENST00000450119 1997 ntBASIC5.76□□□□□ -1.49
TPM4P67936 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
TPM4P67936 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
TPM4P67936 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
TPM4P67936 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.76□□□□□ -1.49
TPM4P67936 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
TPM4P67936 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
TPM4P67936 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC5.76□□□□□ -1.49
TPM4P67936 AL133388.1-201ENST00000404509 287 ntBASIC5.76□□□□□ -1.49
TPM4P67936 HMGN1P20-201ENST00000411849 300 ntBASIC5.76□□□□□ -1.49
TPM4P67936 AC066692.1-201ENST00000421721 457 ntBASIC5.76□□□□□ -1.49
TPM4P67936 RPL36AP10-201ENST00000421785 322 ntBASIC5.76□□□□□ -1.49
TPM4P67936 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC5.76□□□□□ -1.49
TPM4P67936 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC5.76□□□□□ -1.49
TPM4P67936 BTF3P6-201ENST00000448054 499 ntBASIC5.76□□□□□ -1.49
TPM4P67936 RN7SL51P-201ENST00000468230 285 ntBASIC5.76□□□□□ -1.49
TPM4P67936 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC5.76□□□□□ -1.49
TPM4P67936 AC091544.1-201ENST00000484702 348 ntBASIC5.76□□□□□ -1.49
TPM4P67936 AC138409.2-202ENST00000507274 458 ntBASIC5.76□□□□□ -1.49
TPM4P67936 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC5.76□□□□□ -1.49
TPM4P67936 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC5.76□□□□□ -1.49
TPM4P67936 ANAPC10-213ENST00000512680 505 ntTSL 3 BASIC5.76□□□□□ -1.49
TPM4P67936 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC5.76□□□□□ -1.49
TPM4P67936 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC5.76□□□□□ -1.49
TPM4P67936 AC090022.1-201ENST00000546569 311 ntBASIC5.76□□□□□ -1.49
TPM4P67936 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC5.76□□□□□ -1.49
TPM4P67936 NDUFB4P11-201ENST00000560510 395 ntBASIC5.76□□□□□ -1.49
TPM4P67936 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC5.76□□□□□ -1.49
TPM4P67936 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.76□□□□□ -1.49
TPM4P67936 AL591926.1-201ENST00000620542 217 ntBASIC5.76□□□□□ -1.49
TPM4P67936 AC074101.1-201ENST00000637861 241 ntBASIC5.76□□□□□ -1.49
TPM4P67936 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms