Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 AC005341.1-201ENST00000571086 708 ntBASIC4.49□□□□□ -1.69
LMO4P61968 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC4.49□□□□□ -1.69
LMO4P61968 XIST-210ENST00000602863 775 ntTSL 3 BASIC4.49□□□□□ -1.69
LMO4P61968 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC4.49□□□□□ -1.69
LMO4P61968 BNIP3P19-201ENST00000605397 577 ntBASIC4.49□□□□□ -1.69
LMO4P61968 AC063944.3-201ENST00000609969 533 ntBASIC4.49□□□□□ -1.69
LMO4P61968 AC104763.3-201ENST00000613765 618 ntBASIC4.49□□□□□ -1.69
LMO4P61968 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
LMO4P61968 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
LMO4P61968 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC4.49□□□□□ -1.69
LMO4P61968 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
LMO4P61968 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC4.49□□□□□ -1.69
LMO4P61968 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC4.49□□□□□ -1.69
LMO4P61968 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
LMO4P61968 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
LMO4P61968 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC4.49□□□□□ -1.69
LMO4P61968 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
LMO4P61968 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC4.49□□□□□ -1.69
LMO4P61968 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC4.49□□□□□ -1.69
LMO4P61968 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC4.48□□□□□ -1.69
LMO4P61968 MTND4P9-201ENST00000507819 1346 ntBASIC4.48□□□□□ -1.69
LMO4P61968 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
LMO4P61968 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
LMO4P61968 MTND5P23-201ENST00000430812 1655 ntBASIC4.48□□□□□ -1.69
LMO4P61968 DNM1P47-203ENST00000571780 12667 ntBASIC4.48□□□□□ -1.69
LMO4P61968 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
LMO4P61968 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
LMO4P61968 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
LMO4P61968 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC4.48□□□□□ -1.69
LMO4P61968 AL592494.2-201ENST00000425455 1548 ntBASIC4.48□□□□□ -1.69
LMO4P61968 FTO-203ENST00000460382 1517 ntTSL 5 BASIC4.48□□□□□ -1.69
LMO4P61968 AC053481.2-202ENST00000582394 1500 ntBASIC4.48□□□□□ -1.69
LMO4P61968 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC4.48□□□□□ -1.69
LMO4P61968 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC4.48□□□□□ -1.69
LMO4P61968 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC4.48□□□□□ -1.69
LMO4P61968 AL353625.1-202ENST00000366273 571 ntBASIC4.48□□□□□ -1.69
LMO4P61968 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC4.48□□□□□ -1.69
LMO4P61968 MIR620-201ENST00000385232 95 ntBASIC4.48□□□□□ -1.69
LMO4P61968 DNAJA1P3-201ENST00000399417 1194 ntBASIC4.48□□□□□ -1.69
LMO4P61968 MIR937-201ENST00000401271 86 ntBASIC4.48□□□□□ -1.69
LMO4P61968 MTATP6P31-201ENST00000406985 692 ntBASIC4.48□□□□□ -1.69
LMO4P61968 RNA5SP487-201ENST00000410186 122 ntBASIC4.48□□□□□ -1.69
LMO4P61968 SEPT7P8-201ENST00000413308 775 ntBASIC4.48□□□□□ -1.69
LMO4P61968 AC234781.4-201ENST00000419384 244 ntBASIC4.48□□□□□ -1.69
LMO4P61968 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC4.48□□□□□ -1.69
LMO4P61968 MTCO1P51-201ENST00000427672 1060 ntBASIC4.48□□□□□ -1.69
LMO4P61968 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC4.48□□□□□ -1.69
LMO4P61968 RPS27P18-201ENST00000431701 247 ntBASIC4.48□□□□□ -1.69
LMO4P61968 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC4.48□□□□□ -1.69
LMO4P61968 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC4.48□□□□□ -1.69
LMO4P61968 SNRPFP2-201ENST00000440710 251 ntBASIC4.48□□□□□ -1.69
LMO4P61968 IGBP1P3-201ENST00000447449 1000 ntBASIC4.48□□□□□ -1.69
LMO4P61968 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC4.48□□□□□ -1.69
LMO4P61968 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC4.48□□□□□ -1.69
LMO4P61968 RN7SL826P-201ENST00000479724 288 ntBASIC4.48□□□□□ -1.69
LMO4P61968 AC108729.1-201ENST00000487812 947 ntBASIC4.48□□□□□ -1.69
LMO4P61968 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC4.48□□□□□ -1.69
LMO4P61968 TPT1P8-201ENST00000510120 555 ntBASIC4.48□□□□□ -1.69
LMO4P61968 AC109464.1-201ENST00000511091 819 ntBASIC4.48□□□□□ -1.69
LMO4P61968 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC4.48□□□□□ -1.69
LMO4P61968 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC4.48□□□□□ -1.69
LMO4P61968 AP003102.1-201ENST00000525638 661 ntBASIC4.48□□□□□ -1.69
LMO4P61968 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC4.48□□□□□ -1.69
LMO4P61968 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC4.48□□□□□ -1.69
LMO4P61968 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC4.48□□□□□ -1.69
LMO4P61968 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
LMO4P61968 NMNAT1P5-201ENST00000559657 841 ntBASIC4.48□□□□□ -1.69
LMO4P61968 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC4.48□□□□□ -1.69
LMO4P61968 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC4.48□□□□□ -1.69
LMO4P61968 MIR3691-201ENST00000578066 90 ntBASIC4.48□□□□□ -1.69
LMO4P61968 AC020915.5-201ENST00000596836 964 ntBASIC4.48□□□□□ -1.69
LMO4P61968 AC245884.10-201ENST00000597355 337 ntBASIC4.48□□□□□ -1.69
LMO4P61968 AC067838.1-201ENST00000606064 577 ntBASIC4.48□□□□□ -1.69
LMO4P61968 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC4.48□□□□□ -1.69
LMO4P61968 AC112503.2-201ENST00000609005 552 ntBASIC4.48□□□□□ -1.69
LMO4P61968 AC016597.2-201ENST00000613256 341 ntBASIC4.48□□□□□ -1.69
LMO4P61968 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC4.48□□□□□ -1.69
LMO4P61968 AC090527.3-201ENST00000619041 548 ntBASIC4.48□□□□□ -1.69
LMO4P61968 AC068870.2-201ENST00000620635 389 ntBASIC4.48□□□□□ -1.69
LMO4P61968 AC091046.2-201ENST00000620775 665 ntBASIC4.48□□□□□ -1.69
LMO4P61968 AL356490.1-201ENST00000623079 479 ntBASIC4.48□□□□□ -1.69
LMO4P61968 AC090772.4-201ENST00000623599 362 ntBASIC4.48□□□□□ -1.69
LMO4P61968 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC4.48□□□□□ -1.69
LMO4P61968 AC008993.2-201ENST00000631744 806 ntBASIC4.48□□□□□ -1.69
LMO4P61968 CYP4F35P-202ENST00000636121 390 ntBASIC4.48□□□□□ -1.69
LMO4P61968 AP000550.3-201ENST00000637734 379 ntBASIC4.48□□□□□ -1.69
LMO4P61968 EEF1A1P14-201ENST00000421195 1376 ntBASIC4.48□□□□□ -1.69
LMO4P61968 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC4.48□□□□□ -1.69
LMO4P61968 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC4.48□□□□□ -1.69
LMO4P61968 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
LMO4P61968 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
LMO4P61968 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
LMO4P61968 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
LMO4P61968 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC4.48□□□□□ -1.69
LMO4P61968 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
LMO4P61968 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC4.48□□□□□ -1.69
LMO4P61968 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC4.48□□□□□ -1.69
LMO4P61968 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
LMO4P61968 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
LMO4P61968 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 113.8 ms