Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 AL356608.1-201ENST00000610034 820 ntBASIC5.64□□□□□ -1.51
LHX1P48742 AL139407.1-201ENST00000613826 1175 ntBASIC5.64□□□□□ -1.51
LHX1P48742 AL353684.1-201ENST00000622677 1120 ntBASIC5.64□□□□□ -1.51
LHX1P48742 WDR75-207ENST00000631047 270 ntTSL 5 BASIC5.64□□□□□ -1.51
LHX1P48742 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
LHX1P48742 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
LHX1P48742 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
LHX1P48742 AC092747.4-201ENST00000620519 1861 ntBASIC5.64□□□□□ -1.51
LHX1P48742 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
LHX1P48742 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
LHX1P48742 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.64□□□□□ -1.51
LHX1P48742 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
LHX1P48742 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
LHX1P48742 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
LHX1P48742 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC5.64□□□□□ -1.51
LHX1P48742 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
LHX1P48742 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.63□□□□□ -1.51
LHX1P48742 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
LHX1P48742 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
LHX1P48742 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
LHX1P48742 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC5.63□□□□□ -1.51
LHX1P48742 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
LHX1P48742 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
LHX1P48742 RN7SKP153-201ENST00000365026 316 ntBASIC5.63□□□□□ -1.51
LHX1P48742 AC083799.1-201ENST00000366451 910 ntBASIC5.63□□□□□ -1.51
LHX1P48742 MRM2-202ENST00000407040 582 ntTSL 3 BASIC5.63□□□□□ -1.51
LHX1P48742 AC098592.2-201ENST00000413158 265 ntBASIC5.63□□□□□ -1.51
LHX1P48742 AC017078.1-201ENST00000416146 368 ntBASIC5.63□□□□□ -1.51
LHX1P48742 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.63□□□□□ -1.51
LHX1P48742 AC124944.2-201ENST00000429866 1242 ntBASIC5.63□□□□□ -1.51
LHX1P48742 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC5.63□□□□□ -1.51
LHX1P48742 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC5.63□□□□□ -1.51
LHX1P48742 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.63□□□□□ -1.51
LHX1P48742 DNAJB5P1-201ENST00000454004 806 ntBASIC5.63□□□□□ -1.51
LHX1P48742 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC5.63□□□□□ -1.51
LHX1P48742 AK5-208ENST00000478255 556 ntTSL 2 BASIC5.63□□□□□ -1.51
LHX1P48742 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC5.63□□□□□ -1.51
LHX1P48742 NPM1P52-201ENST00000518264 846 ntBASIC5.63□□□□□ -1.51
LHX1P48742 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC5.63□□□□□ -1.51
LHX1P48742 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC5.63□□□□□ -1.51
LHX1P48742 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC5.63□□□□□ -1.51
LHX1P48742 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC5.63□□□□□ -1.51
LHX1P48742 AC245128.3-201ENST00000594721 748 ntBASIC5.63□□□□□ -1.51
LHX1P48742 AC020915.5-201ENST00000596836 964 ntBASIC5.63□□□□□ -1.51
LHX1P48742 AC108738.1-201ENST00000603703 237 ntBASIC5.63□□□□□ -1.51
LHX1P48742 AC009597.2-201ENST00000604659 592 ntBASIC5.63□□□□□ -1.51
LHX1P48742 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC5.63□□□□□ -1.51
LHX1P48742 AC211433.2-201ENST00000608433 387 ntBASIC5.63□□□□□ -1.51
LHX1P48742 AC007786.3-201ENST00000615154 596 ntBASIC5.63□□□□□ -1.51
LHX1P48742 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
LHX1P48742 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC5.63□□□□□ -1.51
LHX1P48742 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
LHX1P48742 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
LHX1P48742 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
LHX1P48742 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
LHX1P48742 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
LHX1P48742 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
LHX1P48742 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.63□□□□□ -1.51
LHX1P48742 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.63□□□□□ -1.51
LHX1P48742 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.62□□□□□ -1.51
LHX1P48742 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
LHX1P48742 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.62□□□□□ -1.51
LHX1P48742 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.62□□□□□ -1.51
LHX1P48742 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
LHX1P48742 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
LHX1P48742 GVINP1-202ENST00000531871 7271 ntBASIC5.62□□□□□ -1.51
LHX1P48742 RNA5SP453-201ENST00000362503 119 ntBASIC5.62□□□□□ -1.51
LHX1P48742 OR8V1P-201ENST00000395193 873 ntBASIC5.62□□□□□ -1.51
LHX1P48742 NUDT19P3-201ENST00000404698 555 ntBASIC5.62□□□□□ -1.51
LHX1P48742 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC5.62□□□□□ -1.51
LHX1P48742 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC5.62□□□□□ -1.51
LHX1P48742 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC5.62□□□□□ -1.51
LHX1P48742 MAPRE1P3-201ENST00000435438 796 ntBASIC5.62□□□□□ -1.51
LHX1P48742 AC016772.1-201ENST00000444170 1261 ntBASIC5.62□□□□□ -1.51
LHX1P48742 C1DP3-201ENST00000455013 423 ntBASIC5.62□□□□□ -1.51
LHX1P48742 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC5.62□□□□□ -1.51
LHX1P48742 RPS18P6-201ENST00000476880 458 ntBASIC5.62□□□□□ -1.51
LHX1P48742 AC004815.1-201ENST00000484185 331 ntBASIC5.62□□□□□ -1.51
LHX1P48742 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC5.62□□□□□ -1.51
LHX1P48742 IGBP1P4-201ENST00000503202 879 ntBASIC5.62□□□□□ -1.51
LHX1P48742 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC5.62□□□□□ -1.51
LHX1P48742 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC5.62□□□□□ -1.51
LHX1P48742 SEPT10P1-201ENST00000517342 1162 ntBASIC5.62□□□□□ -1.51
LHX1P48742 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC5.62□□□□□ -1.51
LHX1P48742 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.62□□□□□ -1.51
LHX1P48742 MAL2-208ENST00000523307 556 ntTSL 4 BASIC5.62□□□□□ -1.51
LHX1P48742 AC009268.1-201ENST00000561352 1203 ntBASIC5.62□□□□□ -1.51
LHX1P48742 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC5.62□□□□□ -1.51
LHX1P48742 AL162431.4-201ENST00000604674 411 ntBASIC5.62□□□□□ -1.51
LHX1P48742 MIR6719-201ENST00000622428 87 ntBASIC5.62□□□□□ -1.51
LHX1P48742 AC018445.2-201ENST00000622987 260 ntBASIC5.62□□□□□ -1.51
LHX1P48742 AC109780.1-201ENST00000451768 1344 ntBASIC5.62□□□□□ -1.51
LHX1P48742 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.62□□□□□ -1.51
LHX1P48742 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.62□□□□□ -1.51
LHX1P48742 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
LHX1P48742 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
LHX1P48742 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
LHX1P48742 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.62□□□□□ -1.51
LHX1P48742 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.62□□□□□ -1.51
LHX1P48742 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 114.4 ms