Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC6.76□□□□□ -1.33
COL15A1P39059 OR8Q1P-201ENST00000526467 655 ntBASIC6.76□□□□□ -1.33
COL15A1P39059 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC6.76□□□□□ -1.33
COL15A1P39059 AC005000.1-201ENST00000536192 288 ntBASIC6.76□□□□□ -1.33
COL15A1P39059 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC6.76□□□□□ -1.33
COL15A1P39059 CLMN-206ENST00000556441 452 ntTSL 5 BASIC6.76□□□□□ -1.33
COL15A1P39059 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC6.76□□□□□ -1.33
COL15A1P39059 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC6.76□□□□□ -1.33
COL15A1P39059 AC009597.2-201ENST00000604659 592 ntBASIC6.76□□□□□ -1.33
COL15A1P39059 AC015660.5-201ENST00000623238 564 ntBASIC6.76□□□□□ -1.33
COL15A1P39059 AC091905.4-201ENST00000623432 202 ntBASIC6.76□□□□□ -1.33
COL15A1P39059 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC6.76□□□□□ -1.33
COL15A1P39059 AC092747.4-201ENST00000620519 1861 ntBASIC6.76□□□□□ -1.33
COL15A1P39059 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
COL15A1P39059 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
COL15A1P39059 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
COL15A1P39059 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
COL15A1P39059 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
COL15A1P39059 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
COL15A1P39059 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
COL15A1P39059 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
COL15A1P39059 AC104964.3-201ENST00000606115 2860 ntBASIC6.75□□□□□ -1.33
COL15A1P39059 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
COL15A1P39059 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC6.75□□□□□ -1.33
COL15A1P39059 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC6.75□□□□□ -1.33
COL15A1P39059 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
COL15A1P39059 THAP12P4-201ENST00000528321 2266 ntBASIC6.75□□□□□ -1.33
COL15A1P39059 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
COL15A1P39059 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
COL15A1P39059 AL353625.1-202ENST00000366273 571 ntBASIC6.75□□□□□ -1.33
COL15A1P39059 SNORD56.6-201ENST00000384569 71 ntBASIC6.75□□□□□ -1.33
COL15A1P39059 MIR141-201ENST00000384975 95 ntBASIC6.75□□□□□ -1.33
COL15A1P39059 AL078599.1-201ENST00000402075 293 ntBASIC6.75□□□□□ -1.33
COL15A1P39059 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
COL15A1P39059 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC6.75□□□□□ -1.33
COL15A1P39059 DDX39BP1-205ENST00000422507 192 ntBASIC6.75□□□□□ -1.33
COL15A1P39059 SEC63P1-201ENST00000425785 1258 ntBASIC6.75□□□□□ -1.33
COL15A1P39059 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC6.75□□□□□ -1.33
COL15A1P39059 RHOT1P3-201ENST00000436571 331 ntBASIC6.75□□□□□ -1.33
COL15A1P39059 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC6.75□□□□□ -1.33
COL15A1P39059 AC073465.2-201ENST00000440938 498 ntBASIC6.75□□□□□ -1.33
COL15A1P39059 RPL31P44-201ENST00000447680 377 ntBASIC6.75□□□□□ -1.33
COL15A1P39059 AC097484.1-201ENST00000471148 389 ntBASIC6.75□□□□□ -1.33
COL15A1P39059 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC6.75□□□□□ -1.33
COL15A1P39059 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC6.75□□□□□ -1.33
COL15A1P39059 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC6.75□□□□□ -1.33
COL15A1P39059 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
COL15A1P39059 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
COL15A1P39059 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
COL15A1P39059 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
COL15A1P39059 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC6.75□□□□□ -1.33
COL15A1P39059 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC6.75□□□□□ -1.33
COL15A1P39059 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC6.75□□□□□ -1.33
COL15A1P39059 AL713998.2-201ENST00000604538 1198 ntBASIC6.75□□□□□ -1.33
COL15A1P39059 AL627230.1-201ENST00000613077 211 ntBASIC6.75□□□□□ -1.33
COL15A1P39059 AL591926.8-201ENST00000616876 211 ntBASIC6.75□□□□□ -1.33
COL15A1P39059 AC112694.2-201ENST00000623697 768 ntBASIC6.75□□□□□ -1.33
COL15A1P39059 AC000095.2-202ENST00000637415 154 ntBASIC6.75□□□□□ -1.33
COL15A1P39059 CASC19-221ENST00000641309 1382 ntBASIC6.75□□□□□ -1.33
COL15A1P39059 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
COL15A1P39059 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
COL15A1P39059 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
COL15A1P39059 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
COL15A1P39059 SELE-204ENST00000367776 3576 ntTSL 5 BASIC6.75□□□□□ -1.33
COL15A1P39059 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
COL15A1P39059 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC6.74□□□□□ -1.33
COL15A1P39059 AP000641.1-201ENST00000531988 1639 ntBASIC6.74□□□□□ -1.33
COL15A1P39059 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
COL15A1P39059 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
COL15A1P39059 AC007159.1-201ENST00000566529 4706 ntBASIC6.74□□□□□ -1.33
COL15A1P39059 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
COL15A1P39059 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC6.74□□□□□ -1.33
COL15A1P39059 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
COL15A1P39059 U3.3-201ENST00000362986 216 ntBASIC6.74□□□□□ -1.33
COL15A1P39059 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
COL15A1P39059 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
COL15A1P39059 FABP12P1-201ENST00000401911 322 ntBASIC6.74□□□□□ -1.33
COL15A1P39059 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC6.74□□□□□ -1.33
COL15A1P39059 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
COL15A1P39059 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC6.74□□□□□ -1.33
COL15A1P39059 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC6.74□□□□□ -1.33
COL15A1P39059 AP000949.1-201ENST00000438328 629 ntBASIC6.74□□□□□ -1.33
COL15A1P39059 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC6.74□□□□□ -1.33
COL15A1P39059 AC009220.1-201ENST00000451614 275 ntBASIC6.74□□□□□ -1.33
COL15A1P39059 RPS29P33-201ENST00000456717 146 ntBASIC6.74□□□□□ -1.33
COL15A1P39059 FTH1P2-201ENST00000466086 412 ntBASIC6.74□□□□□ -1.33
COL15A1P39059 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC6.74□□□□□ -1.33
COL15A1P39059 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC6.74□□□□□ -1.33
COL15A1P39059 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC6.74□□□□□ -1.33
COL15A1P39059 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC6.74□□□□□ -1.33
COL15A1P39059 SCARNA20.4-201ENST00000516969 131 ntBASIC6.74□□□□□ -1.33
COL15A1P39059 SUMO2P19-201ENST00000518920 295 ntBASIC6.74□□□□□ -1.33
COL15A1P39059 AC092451.2-201ENST00000538746 658 ntBASIC6.74□□□□□ -1.33
COL15A1P39059 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC6.74□□□□□ -1.33
COL15A1P39059 AC063949.1-201ENST00000552900 865 ntBASIC6.74□□□□□ -1.33
COL15A1P39059 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC6.74□□□□□ -1.33
COL15A1P39059 MIR4691-201ENST00000583764 85 ntBASIC6.74□□□□□ -1.33
COL15A1P39059 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC6.74□□□□□ -1.33
COL15A1P39059 AC018690.1-201ENST00000608144 626 ntBASIC6.74□□□□□ -1.33
COL15A1P39059 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC6.74□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms