Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CIITAP33076 RNA5SP487-201ENST00000410186 122 ntBASIC6.12□□□□□ -1.43
CIITAP33076 AL357078.2-201ENST00000416486 427 ntBASIC6.12□□□□□ -1.43
CIITAP33076 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
CIITAP33076 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC6.12□□□□□ -1.43
CIITAP33076 FAR1P1-201ENST00000427163 934 ntBASIC6.12□□□□□ -1.43
CIITAP33076 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CIITAP33076 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC6.12□□□□□ -1.43
CIITAP33076 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC6.12□□□□□ -1.43
CIITAP33076 AC235565.1-201ENST00000456962 1325 ntBASIC6.12□□□□□ -1.43
CIITAP33076 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC6.12□□□□□ -1.43
CIITAP33076 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC6.12□□□□□ -1.43
CIITAP33076 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC6.12□□□□□ -1.43
CIITAP33076 AC111000.6-201ENST00000514471 709 ntBASIC6.12□□□□□ -1.43
CIITAP33076 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC6.12□□□□□ -1.43
CIITAP33076 HMGB1P40-201ENST00000525121 540 ntBASIC6.12□□□□□ -1.43
CIITAP33076 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CIITAP33076 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CIITAP33076 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC6.12□□□□□ -1.43
CIITAP33076 AC005341.1-201ENST00000571086 708 ntBASIC6.12□□□□□ -1.43
CIITAP33076 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC6.12□□□□□ -1.43
CIITAP33076 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CIITAP33076 CR788268.1-201ENST00000603931 1809 ntBASIC6.12□□□□□ -1.43
CIITAP33076 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC6.12□□□□□ -1.43
CIITAP33076 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC6.12□□□□□ -1.43
CIITAP33076 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC6.12□□□□□ -1.43
CIITAP33076 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC6.12□□□□□ -1.43
CIITAP33076 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
CIITAP33076 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
CIITAP33076 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CIITAP33076 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CIITAP33076 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC6.11□□□□□ -1.43
CIITAP33076 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CIITAP33076 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC6.11□□□□□ -1.43
CIITAP33076 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC6.11□□□□□ -1.43
CIITAP33076 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC6.11□□□□□ -1.43
CIITAP33076 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CIITAP33076 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
CIITAP33076 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CIITAP33076 AC011503.2-201ENST00000594230 1500 ntBASIC6.11□□□□□ -1.43
CIITAP33076 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC6.11□□□□□ -1.43
CIITAP33076 ATP5A1P1-201ENST00000454088 1321 ntBASIC6.11□□□□□ -1.43
CIITAP33076 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
CIITAP33076 RNU6-670P-201ENST00000364312 104 ntBASIC6.11□□□□□ -1.43
CIITAP33076 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
CIITAP33076 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
CIITAP33076 OR4K12P-201ENST00000406538 961 ntBASIC6.11□□□□□ -1.43
CIITAP33076 SLC35E1P1-201ENST00000419313 864 ntBASIC6.11□□□□□ -1.43
CIITAP33076 BX510359.3-201ENST00000422168 306 ntBASIC6.11□□□□□ -1.43
CIITAP33076 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC6.11□□□□□ -1.43
CIITAP33076 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC6.11□□□□□ -1.43
CIITAP33076 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CIITAP33076 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC6.11□□□□□ -1.43
CIITAP33076 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC6.11□□□□□ -1.43
CIITAP33076 AC018638.3-201ENST00000461273 132 ntBASIC6.11□□□□□ -1.43
CIITAP33076 AC092754.1-201ENST00000472975 479 ntBASIC6.11□□□□□ -1.43
CIITAP33076 RPS21P4-201ENST00000487122 248 ntBASIC6.11□□□□□ -1.43
CIITAP33076 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC6.11□□□□□ -1.43
CIITAP33076 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC6.11□□□□□ -1.43
CIITAP33076 RNA5SP373-201ENST00000517271 95 ntBASIC6.11□□□□□ -1.43
CIITAP33076 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC6.11□□□□□ -1.43
CIITAP33076 OR10D4P-201ENST00000525892 951 ntBASIC6.11□□□□□ -1.43
CIITAP33076 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC6.11□□□□□ -1.43
CIITAP33076 OR8G3P-201ENST00000533406 921 ntBASIC6.11□□□□□ -1.43
CIITAP33076 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC6.11□□□□□ -1.43
CIITAP33076 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
CIITAP33076 CR383656.14-201ENST00000551951 406 ntBASIC6.11□□□□□ -1.43
CIITAP33076 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC6.11□□□□□ -1.43
CIITAP33076 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC6.11□□□□□ -1.43
CIITAP33076 MTND2P13-201ENST00000577438 1039 ntBASIC6.11□□□□□ -1.43
CIITAP33076 AC016839.1-201ENST00000578162 867 ntBASIC6.11□□□□□ -1.43
CIITAP33076 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC6.11□□□□□ -1.43
CIITAP33076 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC6.11□□□□□ -1.43
CIITAP33076 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC6.11□□□□□ -1.43
CIITAP33076 SUMO2P15-201ENST00000604285 278 ntBASIC6.11□□□□□ -1.43
CIITAP33076 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC6.11□□□□□ -1.43
CIITAP33076 MIR6826-201ENST00000617808 98 ntBASIC6.11□□□□□ -1.43
CIITAP33076 AL356490.1-201ENST00000623079 479 ntBASIC6.11□□□□□ -1.43
CIITAP33076 AC004656.1-201ENST00000568479 4951 ntBASIC6.11□□□□□ -1.43
CIITAP33076 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CIITAP33076 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
CIITAP33076 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
CIITAP33076 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CIITAP33076 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
CIITAP33076 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC6.11□□□□□ -1.43
CIITAP33076 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC6.11□□□□□ -1.43
CIITAP33076 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CIITAP33076 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CIITAP33076 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
CIITAP33076 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC6.1□□□□□ -1.43
CIITAP33076 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC6.1□□□□□ -1.43
CIITAP33076 FGG-205ENST00000407946 1636 ntTSL 5 BASIC6.1□□□□□ -1.43
CIITAP33076 AC016745.2-201ENST00000608834 3443 ntBASIC6.1□□□□□ -1.43
CIITAP33076 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CIITAP33076 OR55B1P-203ENST00000641518 2602 ntBASIC6.1□□□□□ -1.43
CIITAP33076 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CIITAP33076 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
CIITAP33076 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CIITAP33076 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC6.1□□□□□ -1.43
CIITAP33076 RNU6-883P-201ENST00000384597 107 ntBASIC6.1□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms