Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 AC106806.2-201ENST00000509365 500 ntBASIC5.43□□□□□ -1.54
PKP4Q99569 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC5.43□□□□□ -1.54
PKP4Q99569 MINCR-206ENST00000524335 499 ntTSL 2 BASIC5.43□□□□□ -1.54
PKP4Q99569 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC5.43□□□□□ -1.54
PKP4Q99569 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC5.43□□□□□ -1.54
PKP4Q99569 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC5.43□□□□□ -1.54
PKP4Q99569 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.43□□□□□ -1.54
PKP4Q99569 MTND1P8-201ENST00000571424 950 ntBASIC5.43□□□□□ -1.54
PKP4Q99569 MIR3614-201ENST00000581261 86 ntBASIC5.43□□□□□ -1.54
PKP4Q99569 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC5.43□□□□□ -1.54
PKP4Q99569 AC020915.5-201ENST00000596836 964 ntBASIC5.43□□□□□ -1.54
PKP4Q99569 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC5.43□□□□□ -1.54
PKP4Q99569 AC004241.3-201ENST00000611728 517 ntBASIC5.43□□□□□ -1.54
PKP4Q99569 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC5.43□□□□□ -1.54
PKP4Q99569 AC008115.3-201ENST00000614874 549 ntBASIC5.43□□□□□ -1.54
PKP4Q99569 AC025574.2-201ENST00000615621 514 ntBASIC5.43□□□□□ -1.54
PKP4Q99569 AC015722.2-201ENST00000622210 551 ntBASIC5.43□□□□□ -1.54
PKP4Q99569 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
PKP4Q99569 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
PKP4Q99569 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
PKP4Q99569 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.43□□□□□ -1.54
PKP4Q99569 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
PKP4Q99569 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.43□□□□□ -1.54
PKP4Q99569 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
PKP4Q99569 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
PKP4Q99569 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.43□□□□□ -1.54
PKP4Q99569 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC5.42□□□□□ -1.54
PKP4Q99569 AC018809.2-201ENST00000602436 3823 ntBASIC5.42□□□□□ -1.54
PKP4Q99569 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.42□□□□□ -1.54
PKP4Q99569 RBPJP2-201ENST00000618187 1444 ntBASIC5.42□□□□□ -1.54
PKP4Q99569 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.42□□□□□ -1.54
PKP4Q99569 CASC19-260ENST00000641828 2001 ntBASIC5.42□□□□□ -1.54
PKP4Q99569 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
PKP4Q99569 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
PKP4Q99569 AC010132.2-201ENST00000295493 1043 ntBASIC5.42□□□□□ -1.54
PKP4Q99569 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC5.42□□□□□ -1.54
PKP4Q99569 TMSB4XP4-201ENST00000323496 618 ntBASIC5.42□□□□□ -1.54
PKP4Q99569 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC5.42□□□□□ -1.54
PKP4Q99569 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
PKP4Q99569 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
PKP4Q99569 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
PKP4Q99569 OR6E1P-201ENST00000414424 923 ntBASIC5.42□□□□□ -1.54
PKP4Q99569 AL596448.1-201ENST00000415024 392 ntBASIC5.42□□□□□ -1.54
PKP4Q99569 BMS1P17-202ENST00000416720 316 ntBASIC5.42□□□□□ -1.54
PKP4Q99569 GTF3AP1-201ENST00000416942 1004 ntBASIC5.42□□□□□ -1.54
PKP4Q99569 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC5.42□□□□□ -1.54
PKP4Q99569 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC5.42□□□□□ -1.54
PKP4Q99569 AL133173.1-201ENST00000423458 397 ntBASIC5.42□□□□□ -1.54
PKP4Q99569 AC093084.1-201ENST00000424233 687 ntBASIC5.42□□□□□ -1.54
PKP4Q99569 AJ239321.1-201ENST00000424255 564 ntBASIC5.42□□□□□ -1.54
PKP4Q99569 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
PKP4Q99569 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.42□□□□□ -1.54
PKP4Q99569 FMO7P-201ENST00000436045 768 ntBASIC5.42□□□□□ -1.54
PKP4Q99569 HMGN1P36-201ENST00000446623 298 ntBASIC5.42□□□□□ -1.54
PKP4Q99569 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC5.42□□□□□ -1.54
PKP4Q99569 CCRL1P1-201ENST00000449542 1053 ntBASIC5.42□□□□□ -1.54
PKP4Q99569 AL450023.1-201ENST00000450868 751 ntBASIC5.42□□□□□ -1.54
PKP4Q99569 VDAC2P4-201ENST00000452925 711 ntBASIC5.42□□□□□ -1.54
PKP4Q99569 STRADBP1-201ENST00000478954 1281 ntBASIC5.42□□□□□ -1.54
PKP4Q99569 AC111000.6-201ENST00000514471 709 ntBASIC5.42□□□□□ -1.54
PKP4Q99569 SEC11B-201ENST00000518383 499 ntBASIC5.42□□□□□ -1.54
PKP4Q99569 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC5.42□□□□□ -1.54
PKP4Q99569 OR8Q1P-201ENST00000526467 655 ntBASIC5.42□□□□□ -1.54
PKP4Q99569 OR5AM1P-201ENST00000532136 1032 ntBASIC5.42□□□□□ -1.54
PKP4Q99569 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
PKP4Q99569 AL049872.1-201ENST00000556323 322 ntBASIC5.42□□□□□ -1.54
PKP4Q99569 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.42□□□□□ -1.54
PKP4Q99569 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.42□□□□□ -1.54
PKP4Q99569 MRPS21P7-201ENST00000566937 238 ntBASIC5.42□□□□□ -1.54
PKP4Q99569 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC5.42□□□□□ -1.54
PKP4Q99569 MIR4505-201ENST00000582238 73 ntBASIC5.42□□□□□ -1.54
PKP4Q99569 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.42□□□□□ -1.54
PKP4Q99569 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC5.42□□□□□ -1.54
PKP4Q99569 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC5.42□□□□□ -1.54
PKP4Q99569 AC015802.5-201ENST00000607478 399 ntBASIC5.42□□□□□ -1.54
PKP4Q99569 RN7SL787P-201ENST00000613000 284 ntBASIC5.42□□□□□ -1.54
PKP4Q99569 AC127024.6-201ENST00000621598 424 ntBASIC5.42□□□□□ -1.54
PKP4Q99569 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC5.42□□□□□ -1.54
PKP4Q99569 AC008691.1-209ENST00000642094 814 ntBASIC5.42□□□□□ -1.54
PKP4Q99569 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.42□□□□□ -1.54
PKP4Q99569 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
PKP4Q99569 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
PKP4Q99569 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
PKP4Q99569 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC5.42□□□□□ -1.54
PKP4Q99569 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
PKP4Q99569 AC027228.2-201ENST00000567141 2154 ntBASIC5.42□□□□□ -1.54
PKP4Q99569 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
PKP4Q99569 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
PKP4Q99569 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.41□□□□□ -1.54
PKP4Q99569 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PKP4Q99569 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PKP4Q99569 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
PKP4Q99569 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.41□□□□□ -1.54
PKP4Q99569 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.41□□□□□ -1.54
PKP4Q99569 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.41□□□□□ -1.54
PKP4Q99569 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.41□□□□□ -1.54
PKP4Q99569 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PKP4Q99569 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.41□□□□□ -1.54
PKP4Q99569 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
PKP4Q99569 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms