Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC4.91□□□□□ -1.62
SHC1P29353 AP004607.2-201ENST00000533949 322 ntBASIC4.91□□□□□ -1.62
SHC1P29353 OR11H3P-201ENST00000554547 982 ntBASIC4.91□□□□□ -1.62
SHC1P29353 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC4.91□□□□□ -1.62
SHC1P29353 AC009852.2-201ENST00000567898 485 ntBASIC4.91□□□□□ -1.62
SHC1P29353 CDC42EP3P1-201ENST00000601004 764 ntBASIC4.91□□□□□ -1.62
SHC1P29353 AC092574.1-201ENST00000609771 420 ntBASIC4.91□□□□□ -1.62
SHC1P29353 AC005840.5-201ENST00000619166 599 ntBASIC4.91□□□□□ -1.62
SHC1P29353 AC135068.5-201ENST00000624197 983 ntBASIC4.91□□□□□ -1.62
SHC1P29353 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC4.91□□□□□ -1.62
SHC1P29353 AC112198.2-201ENST00000426589 6996 ntBASIC4.91□□□□□ -1.62
SHC1P29353 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC4.91□□□□□ -1.62
SHC1P29353 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
SHC1P29353 CYP4Z2P-201ENST00000423332 1512 ntBASIC4.91□□□□□ -1.62
SHC1P29353 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
SHC1P29353 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC4.91□□□□□ -1.62
SHC1P29353 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SHC1P29353 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC4.9□□□□□ -1.62
SHC1P29353 AC011755.1-201ENST00000623763 2049 ntBASIC4.9□□□□□ -1.62
SHC1P29353 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
SHC1P29353 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
SHC1P29353 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.62
SHC1P29353 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC4.9□□□□□ -1.62
SHC1P29353 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC4.9□□□□□ -1.62
SHC1P29353 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
SHC1P29353 SNORA51.1-201ENST00000363243 140 ntBASIC4.9□□□□□ -1.63
SHC1P29353 RNA5SP335-201ENST00000363817 110 ntBASIC4.9□□□□□ -1.63
SHC1P29353 AC083799.1-201ENST00000366451 910 ntBASIC4.9□□□□□ -1.63
SHC1P29353 SNORD56.6-201ENST00000384569 71 ntBASIC4.9□□□□□ -1.63
SHC1P29353 AL133388.1-201ENST00000404509 287 ntBASIC4.9□□□□□ -1.63
SHC1P29353 RN7SKP59-201ENST00000410520 314 ntBASIC4.9□□□□□ -1.63
SHC1P29353 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC4.9□□□□□ -1.63
SHC1P29353 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC4.9□□□□□ -1.63
SHC1P29353 PRUNEP1-201ENST00000425846 705 ntBASIC4.9□□□□□ -1.63
SHC1P29353 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC4.9□□□□□ -1.63
SHC1P29353 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC4.9□□□□□ -1.63
SHC1P29353 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
SHC1P29353 AC105399.1-202ENST00000447303 205 ntBASIC4.9□□□□□ -1.63
SHC1P29353 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC4.9□□□□□ -1.63
SHC1P29353 RPS26P41-201ENST00000450370 284 ntBASIC4.9□□□□□ -1.63
SHC1P29353 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC4.9□□□□□ -1.63
SHC1P29353 OR2AF1P-201ENST00000454899 889 ntBASIC4.9□□□□□ -1.63
SHC1P29353 AC089999.1-201ENST00000460336 374 ntBASIC4.9□□□□□ -1.63
SHC1P29353 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC4.9□□□□□ -1.63
SHC1P29353 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC4.9□□□□□ -1.63
SHC1P29353 AC109464.1-201ENST00000511091 819 ntBASIC4.9□□□□□ -1.63
SHC1P29353 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC4.9□□□□□ -1.63
SHC1P29353 MTND6P2-201ENST00000512226 524 ntBASIC4.9□□□□□ -1.63
SHC1P29353 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC4.9□□□□□ -1.63
SHC1P29353 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC4.9□□□□□ -1.63
SHC1P29353 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC4.9□□□□□ -1.63
SHC1P29353 SMARCE1P3-201ENST00000553649 1231 ntBASIC4.9□□□□□ -1.63
SHC1P29353 BLZF2P-201ENST00000553776 1130 ntBASIC4.9□□□□□ -1.63
SHC1P29353 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC4.9□□□□□ -1.63
SHC1P29353 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC4.9□□□□□ -1.63
SHC1P29353 NMNAT1P5-201ENST00000559657 841 ntBASIC4.9□□□□□ -1.63
SHC1P29353 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC4.9□□□□□ -1.63
SHC1P29353 MIR4489-201ENST00000578869 62 ntBASIC4.9□□□□□ -1.63
SHC1P29353 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC4.9□□□□□ -1.63
SHC1P29353 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC4.9□□□□□ -1.63
SHC1P29353 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC4.9□□□□□ -1.63
SHC1P29353 AC012467.1-201ENST00000607740 256 ntBASIC4.9□□□□□ -1.63
SHC1P29353 MIR6886-201ENST00000619864 61 ntBASIC4.9□□□□□ -1.63
SHC1P29353 AC243960.7-201ENST00000623532 707 ntBASIC4.9□□□□□ -1.63
SHC1P29353 AC020923.1-201ENST00000624021 917 ntBASIC4.9□□□□□ -1.63
SHC1P29353 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC4.9□□□□□ -1.63
SHC1P29353 AC073869.8-201ENST00000641806 335 ntBASIC4.9□□□□□ -1.63
SHC1P29353 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
SHC1P29353 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
SHC1P29353 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC4.9□□□□□ -1.63
SHC1P29353 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC4.9□□□□□ -1.63
SHC1P29353 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
SHC1P29353 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
SHC1P29353 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
SHC1P29353 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SHC1P29353 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC4.89□□□□□ -1.63
SHC1P29353 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SHC1P29353 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC4.89□□□□□ -1.63
SHC1P29353 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SHC1P29353 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC4.89□□□□□ -1.63
SHC1P29353 AC003973.3-201ENST00000624863 2822 ntBASIC4.89□□□□□ -1.63
SHC1P29353 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC4.89□□□□□ -1.63
SHC1P29353 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC4.89□□□□□ -1.63
SHC1P29353 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
SHC1P29353 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC4.89□□□□□ -1.63
SHC1P29353 MTCO1P11-201ENST00000429111 1528 ntBASIC4.89□□□□□ -1.63
SHC1P29353 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SHC1P29353 RN7SKP160-201ENST00000363804 340 ntBASIC4.89□□□□□ -1.63
SHC1P29353 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SHC1P29353 PPIAP9-201ENST00000403866 498 ntBASIC4.89□□□□□ -1.63
SHC1P29353 AC244033.1-201ENST00000426826 870 ntBASIC4.89□□□□□ -1.63
SHC1P29353 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC4.89□□□□□ -1.63
SHC1P29353 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SHC1P29353 CYCSP6-201ENST00000434498 302 ntBASIC4.89□□□□□ -1.63
SHC1P29353 GSTM5P1-201ENST00000434751 660 ntBASIC4.89□□□□□ -1.63
SHC1P29353 CYCSP12-201ENST00000437729 300 ntBASIC4.89□□□□□ -1.63
SHC1P29353 ZNF736P1Y-201ENST00000440402 1276 ntBASIC4.89□□□□□ -1.63
SHC1P29353 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SHC1P29353 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC4.89□□□□□ -1.63
SHC1P29353 SIAH1P1-201ENST00000479411 923 ntBASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 129.4 ms