Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC6.12□□□□□ -1.43
ATF4P18848 SLC25A51P2-201ENST00000535708 889 ntBASIC6.12□□□□□ -1.43
ATF4P18848 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
ATF4P18848 AC022075.2-201ENST00000535911 562 ntTSL 4 BASIC6.12□□□□□ -1.43
ATF4P18848 AC025252.2-201ENST00000537470 502 ntBASIC6.12□□□□□ -1.43
ATF4P18848 AP002991.1-201ENST00000539305 574 ntTSL 4 BASIC6.12□□□□□ -1.43
ATF4P18848 SRSF5-206ENST00000554021 567 ntTSL 4 BASIC6.12□□□□□ -1.43
ATF4P18848 ZNF519P3-201ENST00000557158 1032 ntBASIC6.12□□□□□ -1.43
ATF4P18848 NUMB-232ENST00000560335 1586 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
ATF4P18848 HNRNPA1P74-201ENST00000560782 835 ntBASIC6.12□□□□□ -1.43
ATF4P18848 AC026461.2-201ENST00000568608 244 ntTSL 5 BASIC6.12□□□□□ -1.43
ATF4P18848 ERI2-215ENST00000569729 2646 ntTSL 2 BASIC6.12□□□□□ -1.43
ATF4P18848 AC093826.2-201ENST00000579042 108 ntBASIC6.12□□□□□ -1.43
ATF4P18848 MTND1P15-201ENST00000579262 949 ntBASIC6.12□□□□□ -1.43
ATF4P18848 GOSR1-212ENST00000581721 756 ntTSL 5 BASIC6.12□□□□□ -1.43
ATF4P18848 MIR4637-201ENST00000582405 84 ntBASIC6.12□□□□□ -1.43
ATF4P18848 AC021382.2-201ENST00000584547 922 ntTSL 3 BASIC6.12□□□□□ -1.43
ATF4P18848 AC067968.1-201ENST00000591793 3766 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
ATF4P18848 ZNF208-202ENST00000597040 781 ntTSL 2 BASIC6.12□□□□□ -1.43
ATF4P18848 ZNF431-206ENST00000599296 586 ntTSL 5 BASIC6.12□□□□□ -1.43
ATF4P18848 AC112187.2-201ENST00000604345 283 ntBASIC6.12□□□□□ -1.43
ATF4P18848 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC6.12□□□□□ -1.43
ATF4P18848 ELMO2P1-202ENST00000614283 794 ntBASIC6.12□□□□□ -1.43
ATF4P18848 uc_338.33-201ENST00000614988 170 ntBASIC6.12□□□□□ -1.43
ATF4P18848 CEACAM5-208ENST00000615021 1694 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
ATF4P18848 FAM74A6-203ENST00000615956 481 ntBASIC6.12□□□□□ -1.43
ATF4P18848 Metazoa_SRP.192-201ENST00000616260 286 ntBASIC6.12□□□□□ -1.43
ATF4P18848 AL049541.2-201ENST00000626377 555 ntBASIC6.12□□□□□ -1.43
ATF4P18848 AC183089.2-201ENST00000637931 916 ntBASIC6.12□□□□□ -1.43
ATF4P18848 PIGN-238ENST00000639758 4239 ntTSL 5 BASIC6.12□□□□□ -1.43
ATF4P18848 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
ATF4P18848 ZNF430-201ENST00000261560 3923 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
ATF4P18848 FGFR2-213ENST00000369061 3803 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
ATF4P18848 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC6.12□□□□□ -1.43
ATF4P18848 AL445437.1-201ENST00000623157 3087 ntBASIC6.12□□□□□ -1.43
ATF4P18848 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC6.12□□□□□ -1.43
ATF4P18848 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
ATF4P18848 SULT1C2-202ENST00000326853 2828 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
ATF4P18848 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC6.12□□□□□ -1.43
ATF4P18848 KIF27-201ENST00000297814 4653 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
ATF4P18848 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC6.11□□□□□ -1.43
ATF4P18848 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
ATF4P18848 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
ATF4P18848 CLK1-215ENST00000621181 1843 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
ATF4P18848 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC6.11□□□□□ -1.43
ATF4P18848 SMAD1-202ENST00000394092 1658 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
ATF4P18848 AL034370.1-201ENST00000397254 1590 ntBASIC6.11□□□□□ -1.43
ATF4P18848 AC015799.1-201ENST00000622996 3122 ntBASIC6.11□□□□□ -1.43
ATF4P18848 NIN-204ENST00000382043 4216 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
ATF4P18848 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
ATF4P18848 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
ATF4P18848 OR2G2-201ENST00000320065 954 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
ATF4P18848 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
ATF4P18848 FAM177B-201ENST00000360827 764 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
ATF4P18848 Y_RNA.6-201ENST00000362350 114 ntBASIC6.11□□□□□ -1.43
ATF4P18848 RNU1-146P-201ENST00000364015 165 ntBASIC6.11□□□□□ -1.43
ATF4P18848 SNORA7B-201ENST00000384360 139 ntBASIC6.11□□□□□ -1.43
ATF4P18848 RNU6-921P-201ENST00000384361 107 ntBASIC6.11□□□□□ -1.43
ATF4P18848 RNU6-441P-201ENST00000384545 106 ntBASIC6.11□□□□□ -1.43
ATF4P18848 MIR649-201ENST00000384843 97 ntBASIC6.11□□□□□ -1.43
ATF4P18848 IYD-205ENST00000392256 882 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
ATF4P18848 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
ATF4P18848 TDGF1P4-201ENST00000401555 520 ntBASIC6.11□□□□□ -1.43
ATF4P18848 RPS24P12-201ENST00000402084 394 ntBASIC6.11□□□□□ -1.43
ATF4P18848 U3.34-201ENST00000408198 212 ntBASIC6.11□□□□□ -1.43
ATF4P18848 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC6.11□□□□□ -1.43
ATF4P18848 RNU6-603P-201ENST00000411403 107 ntBASIC6.11□□□□□ -1.43
ATF4P18848 UBE2V1P10-201ENST00000414685 269 ntBASIC6.11□□□□□ -1.43
ATF4P18848 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC6.11□□□□□ -1.43
ATF4P18848 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
ATF4P18848 AL713965.1-201ENST00000421166 230 ntTSL 5 BASIC6.11□□□□□ -1.43
ATF4P18848 AC099336.2-201ENST00000422457 254 ntBASIC6.11□□□□□ -1.43
ATF4P18848 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
ATF4P18848 GAPDHP51-201ENST00000426454 1000 ntBASIC6.11□□□□□ -1.43
ATF4P18848 AC096632.1-201ENST00000427395 310 ntBASIC6.11□□□□□ -1.43
ATF4P18848 GRM7-AS2-201ENST00000427748 520 ntTSL 2 BASIC6.11□□□□□ -1.43
ATF4P18848 OFD1P13Y-201ENST00000431179 1232 ntBASIC6.11□□□□□ -1.43
ATF4P18848 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC6.11□□□□□ -1.43
ATF4P18848 Z98752.2-201ENST00000432727 312 ntBASIC6.11□□□□□ -1.43
ATF4P18848 AL954705.1-201ENST00000435277 559 ntBASIC6.11□□□□□ -1.43
ATF4P18848 MTND1P28-201ENST00000435623 950 ntBASIC6.11□□□□□ -1.43
ATF4P18848 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC6.11□□□□□ -1.43
ATF4P18848 AL645568.1-202ENST00000437190 1016 ntTSL 5 BASIC6.11□□□□□ -1.43
ATF4P18848 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC6.11□□□□□ -1.43
ATF4P18848 RPL23AP16-201ENST00000441715 421 ntBASIC6.11□□□□□ -1.43
ATF4P18848 AL592182.2-201ENST00000442477 858 ntTSL 2 BASIC6.11□□□□□ -1.43
ATF4P18848 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC6.11□□□□□ -1.43
ATF4P18848 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
ATF4P18848 EEF1E1P1-201ENST00000446998 430 ntBASIC6.11□□□□□ -1.43
ATF4P18848 LIF-AS1-201ENST00000447565 808 ntTSL 3 BASIC6.11□□□□□ -1.43
ATF4P18848 KDM4A-AS1-205ENST00000453015 647 ntTSL 2 BASIC6.11□□□□□ -1.43
ATF4P18848 AC010878.1-201ENST00000456500 1047 ntBASIC6.11□□□□□ -1.43
ATF4P18848 AC099560.2-201ENST00000457554 255 ntBASIC6.11□□□□□ -1.43
ATF4P18848 AC074051.1-201ENST00000470389 781 ntBASIC6.11□□□□□ -1.43
ATF4P18848 AC099340.1-201ENST00000475247 599 ntBASIC6.11□□□□□ -1.43
ATF4P18848 ADAM3A-206ENST00000484602 1046 ntTSL 2 BASIC6.11□□□□□ -1.43
ATF4P18848 AC011825.1-201ENST00000484967 388 ntBASIC6.11□□□□□ -1.43
ATF4P18848 RPL17P37-201ENST00000490729 548 ntBASIC6.11□□□□□ -1.43
ATF4P18848 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC6.11□□□□□ -1.43
ATF4P18848 AC113208.1-201ENST00000497944 318 ntBASIC6.11□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 117.4 ms