Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
HLA-DQB2P05538 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
HLA-DQB2P05538 U3.7-201ENST00000363668 216 ntBASIC5.22□□□□□ -1.57
HLA-DQB2P05538 AL035079.1-201ENST00000405210 287 ntBASIC5.22□□□□□ -1.57
HLA-DQB2P05538 U3.32-201ENST00000408116 212 ntBASIC5.22□□□□□ -1.57
HLA-DQB2P05538 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
HLA-DQB2P05538 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC5.22□□□□□ -1.57
HLA-DQB2P05538 MARK2P12-201ENST00000420129 585 ntBASIC5.22□□□□□ -1.57
HLA-DQB2P05538 VTI1BP4-201ENST00000427516 527 ntBASIC5.22□□□□□ -1.57
HLA-DQB2P05538 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC5.22□□□□□ -1.57
HLA-DQB2P05538 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.22□□□□□ -1.57
HLA-DQB2P05538 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC5.22□□□□□ -1.57
HLA-DQB2P05538 AL389915.2-201ENST00000454576 441 ntBASIC5.22□□□□□ -1.57
HLA-DQB2P05538 AC090602.1-201ENST00000469695 252 ntBASIC5.22□□□□□ -1.57
HLA-DQB2P05538 RN7SL30P-201ENST00000488416 306 ntBASIC5.22□□□□□ -1.57
HLA-DQB2P05538 AL049874.2-201ENST00000492636 288 ntBASIC5.22□□□□□ -1.57
HLA-DQB2P05538 MYL12BP2-201ENST00000503948 512 ntBASIC5.22□□□□□ -1.57
HLA-DQB2P05538 AC011411.1-201ENST00000509592 876 ntBASIC5.22□□□□□ -1.57
HLA-DQB2P05538 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC5.22□□□□□ -1.57
HLA-DQB2P05538 AP002373.2-201ENST00000541631 1060 ntBASIC5.22□□□□□ -1.57
HLA-DQB2P05538 RN7SL753P-201ENST00000581238 290 ntBASIC5.22□□□□□ -1.57
HLA-DQB2P05538 SUMO2P15-201ENST00000604285 278 ntBASIC5.22□□□□□ -1.57
HLA-DQB2P05538 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC5.22□□□□□ -1.57
HLA-DQB2P05538 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
HLA-DQB2P05538 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC5.22□□□□□ -1.57
HLA-DQB2P05538 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC5.22□□□□□ -1.57
HLA-DQB2P05538 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
HLA-DQB2P05538 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
HLA-DQB2P05538 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
HLA-DQB2P05538 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
HLA-DQB2P05538 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
HLA-DQB2P05538 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
HLA-DQB2P05538 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC5.22□□□□□ -1.57
HLA-DQB2P05538 AC022417.1-201ENST00000624768 1303 ntBASIC5.22□□□□□ -1.57
HLA-DQB2P05538 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
HLA-DQB2P05538 AL022311.1-201ENST00000623726 19416 ntBASIC5.21□□□□□ -1.57
HLA-DQB2P05538 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.21□□□□□ -1.57
HLA-DQB2P05538 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
HLA-DQB2P05538 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
HLA-DQB2P05538 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
HLA-DQB2P05538 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.21□□□□□ -1.58
HLA-DQB2P05538 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.21□□□□□ -1.58
HLA-DQB2P05538 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
HLA-DQB2P05538 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
HLA-DQB2P05538 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
HLA-DQB2P05538 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
HLA-DQB2P05538 RN7SKP186-201ENST00000365371 303 ntBASIC5.21□□□□□ -1.58
HLA-DQB2P05538 MRRF-207ENST00000373729 870 ntTSL 3 BASIC5.21□□□□□ -1.58
HLA-DQB2P05538 RNA5SP187-201ENST00000384400 119 ntBASIC5.21□□□□□ -1.58
HLA-DQB2P05538 MIR223-201ENST00000385204 110 ntBASIC5.21□□□□□ -1.58
HLA-DQB2P05538 GTF3AP1-201ENST00000416942 1004 ntBASIC5.21□□□□□ -1.58
HLA-DQB2P05538 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC5.21□□□□□ -1.58
HLA-DQB2P05538 AC092647.2-201ENST00000452998 253 ntBASIC5.21□□□□□ -1.58
HLA-DQB2P05538 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC5.21□□□□□ -1.58
HLA-DQB2P05538 AC005412.2-201ENST00000492004 341 ntBASIC5.21□□□□□ -1.58
HLA-DQB2P05538 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC5.21□□□□□ -1.58
HLA-DQB2P05538 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.21□□□□□ -1.58
HLA-DQB2P05538 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC5.21□□□□□ -1.58
HLA-DQB2P05538 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC5.21□□□□□ -1.58
HLA-DQB2P05538 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC5.21□□□□□ -1.58
HLA-DQB2P05538 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
HLA-DQB2P05538 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.21□□□□□ -1.58
HLA-DQB2P05538 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.21□□□□□ -1.58
HLA-DQB2P05538 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
HLA-DQB2P05538 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
HLA-DQB2P05538 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
HLA-DQB2P05538 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.2□□□□□ -1.58
HLA-DQB2P05538 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.2□□□□□ -1.58
HLA-DQB2P05538 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
HLA-DQB2P05538 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC5.2□□□□□ -1.58
HLA-DQB2P05538 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
HLA-DQB2P05538 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
HLA-DQB2P05538 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
HLA-DQB2P05538 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
HLA-DQB2P05538 MAPK10-328ENST00000641553 4009 ntBASIC5.2□□□□□ -1.58
HLA-DQB2P05538 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
HLA-DQB2P05538 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
HLA-DQB2P05538 AL590763.1-201ENST00000398297 1545 ntBASIC5.2□□□□□ -1.58
HLA-DQB2P05538 OR9K1P-201ENST00000326513 941 ntBASIC5.2□□□□□ -1.58
HLA-DQB2P05538 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
HLA-DQB2P05538 SNORA2.3-201ENST00000383920 135 ntBASIC5.2□□□□□ -1.58
HLA-DQB2P05538 RNU6ATAC21P-201ENST00000408656 126 ntBASIC5.2□□□□□ -1.58
HLA-DQB2P05538 AL139148.1-201ENST00000427122 680 ntBASIC5.2□□□□□ -1.58
HLA-DQB2P05538 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC5.2□□□□□ -1.58
HLA-DQB2P05538 BX323845.1-201ENST00000432417 179 ntBASIC5.2□□□□□ -1.58
HLA-DQB2P05538 RPL7AP61-201ENST00000443410 636 ntBASIC5.2□□□□□ -1.58
HLA-DQB2P05538 AC245028.2-201ENST00000458673 253 ntBASIC5.2□□□□□ -1.58
HLA-DQB2P05538 RPS18P6-201ENST00000476880 458 ntBASIC5.2□□□□□ -1.58
HLA-DQB2P05538 BX284632.1-201ENST00000478218 541 ntBASIC5.2□□□□□ -1.58
HLA-DQB2P05538 AC008953.1-201ENST00000497334 318 ntBASIC5.2□□□□□ -1.58
HLA-DQB2P05538 RNA5SP92-201ENST00000516437 110 ntBASIC5.2□□□□□ -1.58
HLA-DQB2P05538 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC5.2□□□□□ -1.58
HLA-DQB2P05538 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC5.2□□□□□ -1.58
HLA-DQB2P05538 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC5.2□□□□□ -1.58
HLA-DQB2P05538 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
HLA-DQB2P05538 AC090022.1-201ENST00000546569 311 ntBASIC5.2□□□□□ -1.58
HLA-DQB2P05538 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC5.2□□□□□ -1.58
HLA-DQB2P05538 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC5.2□□□□□ -1.58
HLA-DQB2P05538 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.2□□□□□ -1.58
HLA-DQB2P05538 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms