Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
PDGFBP01127 AL672167.2-201ENST00000377164 879 ntBASIC5.53□□□□□ -1.52
PDGFBP01127 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
PDGFBP01127 RN7SKP27-201ENST00000410684 333 ntBASIC5.53□□□□□ -1.52
PDGFBP01127 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC5.53□□□□□ -1.52
PDGFBP01127 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
PDGFBP01127 AC106901.1-201ENST00000425086 698 ntBASIC5.53□□□□□ -1.52
PDGFBP01127 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC5.53□□□□□ -1.52
PDGFBP01127 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC5.53□□□□□ -1.52
PDGFBP01127 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC5.53□□□□□ -1.52
PDGFBP01127 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.53□□□□□ -1.52
PDGFBP01127 RPL17P2-201ENST00000491913 451 ntBASIC5.53□□□□□ -1.52
PDGFBP01127 RPL23AP72-201ENST00000492447 435 ntBASIC5.53□□□□□ -1.52
PDGFBP01127 AC026979.1-201ENST00000492525 396 ntBASIC5.53□□□□□ -1.52
PDGFBP01127 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC5.53□□□□□ -1.52
PDGFBP01127 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC5.53□□□□□ -1.52
PDGFBP01127 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC5.53□□□□□ -1.52
PDGFBP01127 AC134698.5-201ENST00000519444 336 ntBASIC5.53□□□□□ -1.52
PDGFBP01127 AC090424.1-201ENST00000535243 736 ntBASIC5.53□□□□□ -1.52
PDGFBP01127 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC5.53□□□□□ -1.52
PDGFBP01127 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC5.53□□□□□ -1.52
PDGFBP01127 AC067838.1-201ENST00000606064 577 ntBASIC5.53□□□□□ -1.52
PDGFBP01127 AL451049.1-201ENST00000608672 497 ntBASIC5.53□□□□□ -1.52
PDGFBP01127 AL352984.2-202ENST00000613699 155 ntBASIC5.53□□□□□ -1.52
PDGFBP01127 TCL6_3.1-201ENST00000619064 137 ntBASIC5.53□□□□□ -1.52
PDGFBP01127 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC5.53□□□□□ -1.52
PDGFBP01127 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC5.53□□□□□ -1.52
PDGFBP01127 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
PDGFBP01127 DNM1P47-203ENST00000571780 12667 ntBASIC5.53□□□□□ -1.52
PDGFBP01127 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
PDGFBP01127 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
PDGFBP01127 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
PDGFBP01127 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
PDGFBP01127 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
PDGFBP01127 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PDGFBP01127 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PDGFBP01127 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PDGFBP01127 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC5.52□□□□□ -1.53
PDGFBP01127 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC5.52□□□□□ -1.53
PDGFBP01127 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
PDGFBP01127 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PDGFBP01127 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.52□□□□□ -1.53
PDGFBP01127 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PDGFBP01127 RNA5SP479-201ENST00000364858 117 ntBASIC5.52□□□□□ -1.53
PDGFBP01127 OR13C3-201ENST00000374781 1108 ntBASIC5.52□□□□□ -1.53
PDGFBP01127 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
PDGFBP01127 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
PDGFBP01127 AL121977.1-201ENST00000401636 979 ntBASIC5.52□□□□□ -1.53
PDGFBP01127 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PDGFBP01127 AL353626.3-201ENST00000413399 657 ntBASIC5.52□□□□□ -1.53
PDGFBP01127 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.52□□□□□ -1.53
PDGFBP01127 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC5.52□□□□□ -1.53
PDGFBP01127 AC012519.1-201ENST00000424588 610 ntBASIC5.52□□□□□ -1.53
PDGFBP01127 ZDHHC20P1-204ENST00000435787 423 ntBASIC5.52□□□□□ -1.53
PDGFBP01127 RPS3AP38-201ENST00000435889 763 ntBASIC5.52□□□□□ -1.53
PDGFBP01127 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC5.52□□□□□ -1.53
PDGFBP01127 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
PDGFBP01127 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC5.52□□□□□ -1.53
PDGFBP01127 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.52□□□□□ -1.53
PDGFBP01127 AC007537.2-201ENST00000472093 511 ntBASIC5.52□□□□□ -1.53
PDGFBP01127 AC020898.1-201ENST00000474167 787 ntBASIC5.52□□□□□ -1.53
PDGFBP01127 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
PDGFBP01127 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC5.52□□□□□ -1.53
PDGFBP01127 RNA5SP373-201ENST00000517271 95 ntBASIC5.52□□□□□ -1.53
PDGFBP01127 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
PDGFBP01127 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC5.52□□□□□ -1.53
PDGFBP01127 AC008033.2-201ENST00000542626 177 ntBASIC5.52□□□□□ -1.53
PDGFBP01127 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC5.52□□□□□ -1.53
PDGFBP01127 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.52□□□□□ -1.53
PDGFBP01127 AC083837.1-201ENST00000565297 2994 ntBASIC5.52□□□□□ -1.53
PDGFBP01127 AP005403.1-201ENST00000579720 229 ntBASIC5.52□□□□□ -1.53
PDGFBP01127 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC5.52□□□□□ -1.53
PDGFBP01127 AC011487.3-201ENST00000593607 453 ntBASIC5.52□□□□□ -1.53
PDGFBP01127 TEX41-238ENST00000604253 709 ntTSL 5 BASIC5.52□□□□□ -1.53
PDGFBP01127 AL159169.2-201ENST00000610061 1269 ntBASIC5.52□□□□□ -1.53
PDGFBP01127 AL355974.3-201ENST00000617383 467 ntBASIC5.52□□□□□ -1.53
PDGFBP01127 MTCO1P1-201ENST00000624263 1081 ntBASIC5.52□□□□□ -1.53
PDGFBP01127 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
PDGFBP01127 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC5.52□□□□□ -1.53
PDGFBP01127 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.52□□□□□ -1.53
PDGFBP01127 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
PDGFBP01127 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC5.52□□□□□ -1.53
PDGFBP01127 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
PDGFBP01127 AC119674.1-213ENST00000641177 1386 ntBASIC5.52□□□□□ -1.53
PDGFBP01127 SMG1P7-201ENST00000565246 2704 ntBASIC5.52□□□□□ -1.53
PDGFBP01127 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC5.52□□□□□ -1.53
PDGFBP01127 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC5.52□□□□□ -1.53
PDGFBP01127 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.52□□□□□ -1.53
PDGFBP01127 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
PDGFBP01127 AL353796.1-201ENST00000561542 3241 ntBASIC5.52□□□□□ -1.53
PDGFBP01127 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.52□□□□□ -1.53
PDGFBP01127 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC5.51□□□□□ -1.53
PDGFBP01127 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.51□□□□□ -1.53
PDGFBP01127 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC5.51□□□□□ -1.53
PDGFBP01127 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
PDGFBP01127 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC5.51□□□□□ -1.53
PDGFBP01127 DOCK11P1-201ENST00000553480 5932 ntBASIC5.51□□□□□ -1.53
PDGFBP01127 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
PDGFBP01127 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC5.51□□□□□ -1.53
PDGFBP01127 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms