Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
H2afb3S4R1G7 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
H2afb3S4R1G7 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
H2afb3S4R1G7 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC15.13■□□□□ 0.01
H2afb3S4R1G7 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
H2afb3S4R1G7 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
H2afb3S4R1G7 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
H2afb3S4R1G7 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC15.13■□□□□ 0.01
H2afb3S4R1G7 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
H2afb3S4R1G7 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
H2afb3S4R1G7 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
H2afb3S4R1G7 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
H2afb3S4R1G7 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
H2afb3S4R1G7 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
H2afb3S4R1G7 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
H2afb3S4R1G7 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
H2afb3S4R1G7 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
H2afb3S4R1G7 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
H2afb3S4R1G7 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC15.12■□□□□ 0.01
H2afb3S4R1G7 Gm37025-201ENSMUST00000195159 829 ntBASIC15.12■□□□□ 0.01
H2afb3S4R1G7 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
H2afb3S4R1G7 Gm44878-201ENSMUST00000205812 1295 ntBASIC15.12■□□□□ 0.01
H2afb3S4R1G7 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
H2afb3S4R1G7 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
H2afb3S4R1G7 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
H2afb3S4R1G7 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
H2afb3S4R1G7 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
H2afb3S4R1G7 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
H2afb3S4R1G7 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
H2afb3S4R1G7 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
H2afb3S4R1G7 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
H2afb3S4R1G7 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
H2afb3S4R1G7 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
H2afb3S4R1G7 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
H2afb3S4R1G7 Haglr-201ENSMUST00000100000 2085 ntBASIC15.12■□□□□ 0.01
H2afb3S4R1G7 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
H2afb3S4R1G7 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
H2afb3S4R1G7 Gm37812-201ENSMUST00000195216 2475 ntBASIC15.11■□□□□ 0.01
H2afb3S4R1G7 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
H2afb3S4R1G7 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
H2afb3S4R1G7 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC15.11■□□□□ 0.01
H2afb3S4R1G7 CT010444.2-201ENSMUST00000217877 1629 ntBASIC15.11■□□□□ 0.01
H2afb3S4R1G7 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
H2afb3S4R1G7 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
H2afb3S4R1G7 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC15.11■□□□□ 0.01
H2afb3S4R1G7 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC15.11■□□□□ 0.01
H2afb3S4R1G7 AC135637.1-201ENSMUST00000227750 365 ntBASIC15.11■□□□□ 0.01
H2afb3S4R1G7 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
H2afb3S4R1G7 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
H2afb3S4R1G7 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
H2afb3S4R1G7 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC15.11■□□□□ 0.01
H2afb3S4R1G7 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
H2afb3S4R1G7 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
H2afb3S4R1G7 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
H2afb3S4R1G7 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
H2afb3S4R1G7 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
H2afb3S4R1G7 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
H2afb3S4R1G7 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
H2afb3S4R1G7 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
H2afb3S4R1G7 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
H2afb3S4R1G7 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
H2afb3S4R1G7 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
H2afb3S4R1G7 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
H2afb3S4R1G7 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
H2afb3S4R1G7 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
H2afb3S4R1G7 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
H2afb3S4R1G7 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
H2afb3S4R1G7 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC15.1■□□□□ 0.01
H2afb3S4R1G7 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
H2afb3S4R1G7 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
H2afb3S4R1G7 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
H2afb3S4R1G7 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
H2afb3S4R1G7 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
H2afb3S4R1G7 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
H2afb3S4R1G7 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC15.1■□□□□ 0.01
H2afb3S4R1G7 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
H2afb3S4R1G7 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
H2afb3S4R1G7 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
H2afb3S4R1G7 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
H2afb3S4R1G7 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
H2afb3S4R1G7 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
H2afb3S4R1G7 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
H2afb3S4R1G7 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
H2afb3S4R1G7 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
H2afb3S4R1G7 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
H2afb3S4R1G7 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
H2afb3S4R1G7 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
H2afb3S4R1G7 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
H2afb3S4R1G7 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
H2afb3S4R1G7 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
H2afb3S4R1G7 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
H2afb3S4R1G7 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
H2afb3S4R1G7 Gm5643-201ENSMUST00000117081 966 ntBASIC15.09■□□□□ 0.01
H2afb3S4R1G7 Gm12527-201ENSMUST00000117967 564 ntBASIC15.09■□□□□ 0.01
H2afb3S4R1G7 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC15.09■□□□□ 0.01
H2afb3S4R1G7 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
H2afb3S4R1G7 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
H2afb3S4R1G7 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
H2afb3S4R1G7 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
H2afb3S4R1G7 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms