Protein–RNA interactions for Protein: Q9Z1J2

Nek4, Serine/threonine-protein kinase Nek4, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nek4Q9Z1J2 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Nek4Q9Z1J2 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Nek4Q9Z1J2 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Nek4Q9Z1J2 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
Nek4Q9Z1J2 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Nek4Q9Z1J2 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC20.47■□□□□ 0.87
Nek4Q9Z1J2 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Nek4Q9Z1J2 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC20.47■□□□□ 0.87
Nek4Q9Z1J2 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC20.47■□□□□ 0.87
Nek4Q9Z1J2 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Nek4Q9Z1J2 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Nek4Q9Z1J2 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Nek4Q9Z1J2 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Nek4Q9Z1J2 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Nek4Q9Z1J2 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Nek4Q9Z1J2 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Nek4Q9Z1J2 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Nek4Q9Z1J2 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Nek4Q9Z1J2 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Nek4Q9Z1J2 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Nek4Q9Z1J2 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Nek4Q9Z1J2 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Nek4Q9Z1J2 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Nek4Q9Z1J2 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC20.46■□□□□ 0.87
Nek4Q9Z1J2 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC20.46■□□□□ 0.87
Nek4Q9Z1J2 Il3ra-202ENSMUST00000223589 738 ntBASIC20.46■□□□□ 0.87
Nek4Q9Z1J2 AC107711.5-202ENSMUST00000226429 702 ntBASIC20.46■□□□□ 0.87
Nek4Q9Z1J2 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Nek4Q9Z1J2 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Nek4Q9Z1J2 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Nek4Q9Z1J2 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Nek4Q9Z1J2 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Nek4Q9Z1J2 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Nek4Q9Z1J2 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Nek4Q9Z1J2 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
Nek4Q9Z1J2 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Nek4Q9Z1J2 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Nek4Q9Z1J2 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Nek4Q9Z1J2 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
Nek4Q9Z1J2 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Nek4Q9Z1J2 Gm8520-201ENSMUST00000186517 868 ntBASIC20.45■□□□□ 0.86
Nek4Q9Z1J2 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Nek4Q9Z1J2 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Nek4Q9Z1J2 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Nek4Q9Z1J2 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Nek4Q9Z1J2 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Nek4Q9Z1J2 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Nek4Q9Z1J2 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Nek4Q9Z1J2 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Nek4Q9Z1J2 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
Nek4Q9Z1J2 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Nek4Q9Z1J2 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Nek4Q9Z1J2 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Nek4Q9Z1J2 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Nek4Q9Z1J2 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Nek4Q9Z1J2 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Nek4Q9Z1J2 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Nek4Q9Z1J2 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Nek4Q9Z1J2 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Nek4Q9Z1J2 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC20.44■□□□□ 0.86
Nek4Q9Z1J2 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Nek4Q9Z1J2 Gm7791-201ENSMUST00000219066 539 ntBASIC20.44■□□□□ 0.86
Nek4Q9Z1J2 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Nek4Q9Z1J2 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Nek4Q9Z1J2 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Nek4Q9Z1J2 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Nek4Q9Z1J2 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Nek4Q9Z1J2 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Nek4Q9Z1J2 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Nek4Q9Z1J2 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Nek4Q9Z1J2 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Nek4Q9Z1J2 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Nek4Q9Z1J2 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Nek4Q9Z1J2 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC20.43■□□□□ 0.86
Nek4Q9Z1J2 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
Nek4Q9Z1J2 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC20.43■□□□□ 0.86
Nek4Q9Z1J2 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Nek4Q9Z1J2 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Nek4Q9Z1J2 Gm715-201ENSMUST00000117865 831 ntBASIC20.43■□□□□ 0.86
Nek4Q9Z1J2 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC20.43■□□□□ 0.86
Nek4Q9Z1J2 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC20.43■□□□□ 0.86
Nek4Q9Z1J2 Timm23-208ENSMUST00000226683 750 ntBASIC20.43■□□□□ 0.86
Nek4Q9Z1J2 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Nek4Q9Z1J2 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Nek4Q9Z1J2 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Nek4Q9Z1J2 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC20.43■□□□□ 0.86
Nek4Q9Z1J2 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Nek4Q9Z1J2 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Nek4Q9Z1J2 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Nek4Q9Z1J2 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Nek4Q9Z1J2 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Nek4Q9Z1J2 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC20.42■□□□□ 0.86
Nek4Q9Z1J2 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nek4Q9Z1J2 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nek4Q9Z1J2 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nek4Q9Z1J2 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Nek4Q9Z1J2 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC20.42■□□□□ 0.86
Nek4Q9Z1J2 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Nek4Q9Z1J2 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Nek4Q9Z1J2 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC20.42■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms