Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC20.54■□□□□ 0.88
HCFC2Q9Y5Z7 CD320-202ENST00000537716 1119 ntTSL 2 BASIC20.54■□□□□ 0.88
HCFC2Q9Y5Z7 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
HCFC2Q9Y5Z7 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
HCFC2Q9Y5Z7 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC20.53■□□□□ 0.88
HCFC2Q9Y5Z7 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
HCFC2Q9Y5Z7 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HCFC2Q9Y5Z7 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HCFC2Q9Y5Z7 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
HCFC2Q9Y5Z7 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC20.53■□□□□ 0.88
HCFC2Q9Y5Z7 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
HCFC2Q9Y5Z7 PCED1CP-201ENST00000419887 785 ntBASIC20.53■□□□□ 0.88
HCFC2Q9Y5Z7 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HCFC2Q9Y5Z7 GXYLT1P6-201ENST00000456472 1187 ntBASIC20.53■□□□□ 0.88
HCFC2Q9Y5Z7 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC20.53■□□□□ 0.88
HCFC2Q9Y5Z7 AL353719.1-201ENST00000566847 864 ntBASIC20.53■□□□□ 0.88
HCFC2Q9Y5Z7 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC20.53■□□□□ 0.88
HCFC2Q9Y5Z7 AL121956.5-201ENST00000625261 221 ntBASIC20.53■□□□□ 0.88
HCFC2Q9Y5Z7 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
HCFC2Q9Y5Z7 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
HCFC2Q9Y5Z7 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HCFC2Q9Y5Z7 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
HCFC2Q9Y5Z7 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HCFC2Q9Y5Z7 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20.53■□□□□ 0.88
HCFC2Q9Y5Z7 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
HCFC2Q9Y5Z7 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
HCFC2Q9Y5Z7 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
HCFC2Q9Y5Z7 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
HCFC2Q9Y5Z7 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
HCFC2Q9Y5Z7 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
HCFC2Q9Y5Z7 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
HCFC2Q9Y5Z7 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC20.52■□□□□ 0.88
HCFC2Q9Y5Z7 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC20.52■□□□□ 0.88
HCFC2Q9Y5Z7 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC20.52■□□□□ 0.88
HCFC2Q9Y5Z7 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
HCFC2Q9Y5Z7 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC20.52■□□□□ 0.88
HCFC2Q9Y5Z7 FAM86EP-206ENST00000510506 987 ntBASIC20.52■□□□□ 0.88
HCFC2Q9Y5Z7 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
HCFC2Q9Y5Z7 KRT126P-201ENST00000549467 1181 ntBASIC20.52■□□□□ 0.88
HCFC2Q9Y5Z7 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC20.52■□□□□ 0.88
HCFC2Q9Y5Z7 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC20.52■□□□□ 0.88
HCFC2Q9Y5Z7 AL121894.2-201ENST00000602977 491 ntBASIC20.52■□□□□ 0.88
HCFC2Q9Y5Z7 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC20.52■□□□□ 0.88
HCFC2Q9Y5Z7 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
HCFC2Q9Y5Z7 SMG8-203ENST00000578922 2178 ntBASIC20.52■□□□□ 0.88
HCFC2Q9Y5Z7 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
HCFC2Q9Y5Z7 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC20.52■□□□□ 0.87
HCFC2Q9Y5Z7 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC20.52■□□□□ 0.87
HCFC2Q9Y5Z7 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC20.52■□□□□ 0.87
HCFC2Q9Y5Z7 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
HCFC2Q9Y5Z7 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HCFC2Q9Y5Z7 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HCFC2Q9Y5Z7 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
HCFC2Q9Y5Z7 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HCFC2Q9Y5Z7 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
HCFC2Q9Y5Z7 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20.51■□□□□ 0.87
HCFC2Q9Y5Z7 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HCFC2Q9Y5Z7 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC20.51■□□□□ 0.87
HCFC2Q9Y5Z7 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC20.51■□□□□ 0.87
HCFC2Q9Y5Z7 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
HCFC2Q9Y5Z7 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
HCFC2Q9Y5Z7 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC20.51■□□□□ 0.87
HCFC2Q9Y5Z7 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC20.51■□□□□ 0.87
HCFC2Q9Y5Z7 AL512604.3-201ENST00000569583 964 ntBASIC20.51■□□□□ 0.87
HCFC2Q9Y5Z7 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC20.51■□□□□ 0.87
HCFC2Q9Y5Z7 AL031432.5-201ENST00000641059 760 ntBASIC20.51■□□□□ 0.87
HCFC2Q9Y5Z7 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
HCFC2Q9Y5Z7 KRT8P8-201ENST00000434750 1448 ntBASIC20.51■□□□□ 0.87
HCFC2Q9Y5Z7 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC20.51■□□□□ 0.87
HCFC2Q9Y5Z7 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HCFC2Q9Y5Z7 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC20.5■□□□□ 0.87
HCFC2Q9Y5Z7 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC20.5■□□□□ 0.87
HCFC2Q9Y5Z7 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.5■□□□□ 0.87
HCFC2Q9Y5Z7 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.5■□□□□ 0.87
HCFC2Q9Y5Z7 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HCFC2Q9Y5Z7 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
HCFC2Q9Y5Z7 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HCFC2Q9Y5Z7 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HCFC2Q9Y5Z7 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC20.5■□□□□ 0.87
HCFC2Q9Y5Z7 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC20.5■□□□□ 0.87
HCFC2Q9Y5Z7 HOMER2P1-201ENST00000455653 964 ntBASIC20.5■□□□□ 0.87
HCFC2Q9Y5Z7 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC20.5■□□□□ 0.87
HCFC2Q9Y5Z7 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC20.5■□□□□ 0.87
HCFC2Q9Y5Z7 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC20.5■□□□□ 0.87
HCFC2Q9Y5Z7 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
HCFC2Q9Y5Z7 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HCFC2Q9Y5Z7 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC20.5■□□□□ 0.87
HCFC2Q9Y5Z7 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.5■□□□□ 0.87
HCFC2Q9Y5Z7 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HCFC2Q9Y5Z7 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.5■□□□□ 0.87
HCFC2Q9Y5Z7 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
HCFC2Q9Y5Z7 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
HCFC2Q9Y5Z7 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC20.49■□□□□ 0.87
HCFC2Q9Y5Z7 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
HCFC2Q9Y5Z7 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.49■□□□□ 0.87
HCFC2Q9Y5Z7 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC20.49■□□□□ 0.87
HCFC2Q9Y5Z7 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC20.49■□□□□ 0.87
HCFC2Q9Y5Z7 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC20.49■□□□□ 0.87
HCFC2Q9Y5Z7 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC20.49■□□□□ 0.87
HCFC2Q9Y5Z7 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms