Protein–RNA interactions for Protein: Q9R1A9

Trex2, Three prime repair exonuclease 2, mousemouse

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex2Q9R1A9 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trex2Q9R1A9 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC14.18□□□□□ -0.14
Trex2Q9R1A9 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trex2Q9R1A9 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trex2Q9R1A9 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC14.18□□□□□ -0.14
Trex2Q9R1A9 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trex2Q9R1A9 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trex2Q9R1A9 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trex2Q9R1A9 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trex2Q9R1A9 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Trex2Q9R1A9 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trex2Q9R1A9 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC14.18□□□□□ -0.14
Trex2Q9R1A9 Gm10517-202ENSMUST00000192970 758 ntBASIC14.18□□□□□ -0.14
Trex2Q9R1A9 AC153881.1-201ENSMUST00000214448 284 ntBASIC14.18□□□□□ -0.14
Trex2Q9R1A9 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Trex2Q9R1A9 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trex2Q9R1A9 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trex2Q9R1A9 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trex2Q9R1A9 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trex2Q9R1A9 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trex2Q9R1A9 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trex2Q9R1A9 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trex2Q9R1A9 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trex2Q9R1A9 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trex2Q9R1A9 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Trex2Q9R1A9 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trex2Q9R1A9 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trex2Q9R1A9 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trex2Q9R1A9 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Trex2Q9R1A9 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trex2Q9R1A9 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Trex2Q9R1A9 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trex2Q9R1A9 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trex2Q9R1A9 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trex2Q9R1A9 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trex2Q9R1A9 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trex2Q9R1A9 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trex2Q9R1A9 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trex2Q9R1A9 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trex2Q9R1A9 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
Trex2Q9R1A9 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trex2Q9R1A9 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC14.17□□□□□ -0.14
Trex2Q9R1A9 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC14.17□□□□□ -0.14
Trex2Q9R1A9 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC14.17□□□□□ -0.14
Trex2Q9R1A9 Gm9694-201ENSMUST00000193347 1189 ntBASIC14.17□□□□□ -0.14
Trex2Q9R1A9 Gm4974-201ENSMUST00000209974 875 ntBASIC14.17□□□□□ -0.14
Trex2Q9R1A9 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trex2Q9R1A9 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trex2Q9R1A9 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trex2Q9R1A9 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trex2Q9R1A9 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trex2Q9R1A9 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trex2Q9R1A9 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trex2Q9R1A9 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trex2Q9R1A9 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
Trex2Q9R1A9 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trex2Q9R1A9 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trex2Q9R1A9 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trex2Q9R1A9 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trex2Q9R1A9 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trex2Q9R1A9 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trex2Q9R1A9 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trex2Q9R1A9 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trex2Q9R1A9 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trex2Q9R1A9 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trex2Q9R1A9 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trex2Q9R1A9 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trex2Q9R1A9 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trex2Q9R1A9 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Trex2Q9R1A9 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trex2Q9R1A9 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trex2Q9R1A9 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trex2Q9R1A9 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trex2Q9R1A9 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trex2Q9R1A9 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trex2Q9R1A9 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC14.16□□□□□ -0.14
Trex2Q9R1A9 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC14.16□□□□□ -0.14
Trex2Q9R1A9 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trex2Q9R1A9 Haglr-201ENSMUST00000100000 2085 ntBASIC14.16□□□□□ -0.14
Trex2Q9R1A9 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC14.16□□□□□ -0.14
Trex2Q9R1A9 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trex2Q9R1A9 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC14.16□□□□□ -0.14
Trex2Q9R1A9 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trex2Q9R1A9 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trex2Q9R1A9 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trex2Q9R1A9 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trex2Q9R1A9 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trex2Q9R1A9 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trex2Q9R1A9 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trex2Q9R1A9 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trex2Q9R1A9 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trex2Q9R1A9 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trex2Q9R1A9 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC14.15□□□□□ -0.14
Trex2Q9R1A9 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC14.15□□□□□ -0.14
Trex2Q9R1A9 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC14.15□□□□□ -0.14
Trex2Q9R1A9 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trex2Q9R1A9 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Trex2Q9R1A9 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trex2Q9R1A9 Ptprs-211ENSMUST00000223859 5588 ntBASIC14.15□□□□□ -0.14
Trex2Q9R1A9 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms