Protein–RNA interactions for Protein: Q9R060

Nubp1, Cytosolic Fe-S cluster assembly factor NUBP1, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp1Q9R060 Haglr-201ENSMUST00000100000 2085 ntBASIC14.69□□□□□ -0.06
Nubp1Q9R060 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Nubp1Q9R060 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nubp1Q9R060 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC14.69□□□□□ -0.06
Nubp1Q9R060 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nubp1Q9R060 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC14.69□□□□□ -0.06
Nubp1Q9R060 Gm15794-201ENSMUST00000120182 631 ntBASIC14.69□□□□□ -0.06
Nubp1Q9R060 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC14.69□□□□□ -0.06
Nubp1Q9R060 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Nubp1Q9R060 Gm21868-201ENSMUST00000185623 1230 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Nubp1Q9R060 Gm20803-202ENSMUST00000190968 1230 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Nubp1Q9R060 Gm43377-201ENSMUST00000201640 455 ntBASIC14.69□□□□□ -0.06
Nubp1Q9R060 Gm31409-201ENSMUST00000209894 710 ntTSL 5 BASIC14.69□□□□□ -0.06
Nubp1Q9R060 AC132446.1-201ENSMUST00000222655 226 ntBASIC14.69□□□□□ -0.06
Nubp1Q9R060 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nubp1Q9R060 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nubp1Q9R060 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nubp1Q9R060 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nubp1Q9R060 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Nubp1Q9R060 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nubp1Q9R060 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nubp1Q9R060 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC14.69□□□□□ -0.06
Nubp1Q9R060 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nubp1Q9R060 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nubp1Q9R060 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Nubp1Q9R060 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nubp1Q9R060 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Nubp1Q9R060 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Nubp1Q9R060 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nubp1Q9R060 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nubp1Q9R060 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nubp1Q9R060 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
Nubp1Q9R060 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Nubp1Q9R060 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nubp1Q9R060 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nubp1Q9R060 AC123834.2-201ENSMUST00000224038 2340 ntBASIC14.68□□□□□ -0.06
Nubp1Q9R060 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Nubp1Q9R060 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Nubp1Q9R060 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC14.68□□□□□ -0.06
Nubp1Q9R060 Gm29791-202ENSMUST00000207888 369 ntBASIC14.68□□□□□ -0.06
Nubp1Q9R060 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nubp1Q9R060 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nubp1Q9R060 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Nubp1Q9R060 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Nubp1Q9R060 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nubp1Q9R060 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nubp1Q9R060 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Nubp1Q9R060 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nubp1Q9R060 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC14.67□□□□□ -0.06
Nubp1Q9R060 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nubp1Q9R060 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nubp1Q9R060 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Nubp1Q9R060 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC14.67□□□□□ -0.06
Nubp1Q9R060 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nubp1Q9R060 Gm3272-201ENSMUST00000181181 1229 ntBASIC14.67□□□□□ -0.06
Nubp1Q9R060 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC14.67□□□□□ -0.06
Nubp1Q9R060 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC14.67□□□□□ -0.06
Nubp1Q9R060 AC159301.1-201ENSMUST00000225130 1182 ntBASIC14.67□□□□□ -0.06
Nubp1Q9R060 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nubp1Q9R060 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC14.67□□□□□ -0.06
Nubp1Q9R060 Gm10566-201ENSMUST00000086739 996 ntBASIC14.67□□□□□ -0.06
Nubp1Q9R060 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Nubp1Q9R060 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Nubp1Q9R060 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nubp1Q9R060 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Nubp1Q9R060 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Nubp1Q9R060 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nubp1Q9R060 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nubp1Q9R060 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Nubp1Q9R060 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nubp1Q9R060 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nubp1Q9R060 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
Nubp1Q9R060 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Nubp1Q9R060 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nubp1Q9R060 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nubp1Q9R060 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nubp1Q9R060 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nubp1Q9R060 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nubp1Q9R060 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nubp1Q9R060 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Nubp1Q9R060 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nubp1Q9R060 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Nubp1Q9R060 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Nubp1Q9R060 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC14.66□□□□□ -0.06
Nubp1Q9R060 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC14.66□□□□□ -0.06
Nubp1Q9R060 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC14.66□□□□□ -0.06
Nubp1Q9R060 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC14.66□□□□□ -0.06
Nubp1Q9R060 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Nubp1Q9R060 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Nubp1Q9R060 Rps4l-201ENSMUST00000071745 943 ntBASIC14.66□□□□□ -0.06
Nubp1Q9R060 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nubp1Q9R060 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nubp1Q9R060 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Nubp1Q9R060 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nubp1Q9R060 Gm45906-201ENSMUST00000208911 1430 ntBASIC14.66□□□□□ -0.06
Nubp1Q9R060 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nubp1Q9R060 Gm3139-202ENSMUST00000201138 1303 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Nubp1Q9R060 Gm3183-203ENSMUST00000202911 1303 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nubp1Q9R060 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nubp1Q9R060 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms