Protein–RNA interactions for Protein: Q9JJV9

Scn5a, Sodium channel protein type 5 subunit alpha, mousemouse

Predictions only

Length 2,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn5aQ9JJV9 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
Scn5aQ9JJV9 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Scn5aQ9JJV9 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Scn5aQ9JJV9 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Scn5aQ9JJV9 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Scn5aQ9JJV9 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Scn5aQ9JJV9 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC17.33■□□□□ 0.36
Scn5aQ9JJV9 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Scn5aQ9JJV9 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC17.33■□□□□ 0.36
Scn5aQ9JJV9 CT009713.7-201ENSMUST00000224689 571 ntBASIC17.33■□□□□ 0.36
Scn5aQ9JJV9 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Scn5aQ9JJV9 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Scn5aQ9JJV9 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Scn5aQ9JJV9 Gm15442-201ENSMUST00000117905 1527 ntBASIC17.32■□□□□ 0.36
Scn5aQ9JJV9 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Scn5aQ9JJV9 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Scn5aQ9JJV9 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Scn5aQ9JJV9 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Scn5aQ9JJV9 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC17.32■□□□□ 0.36
Scn5aQ9JJV9 Gm4995-201ENSMUST00000117247 432 ntBASIC17.32■□□□□ 0.36
Scn5aQ9JJV9 Gm13036-201ENSMUST00000117799 748 ntBASIC17.32■□□□□ 0.36
Scn5aQ9JJV9 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Scn5aQ9JJV9 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Scn5aQ9JJV9 AC159093.1-201ENSMUST00000227779 380 ntBASIC17.32■□□□□ 0.36
Scn5aQ9JJV9 Gm43808-201ENSMUST00000202534 2065 ntBASIC17.32■□□□□ 0.36
Scn5aQ9JJV9 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Scn5aQ9JJV9 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Scn5aQ9JJV9 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC17.32■□□□□ 0.36
Scn5aQ9JJV9 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Scn5aQ9JJV9 Gm43073-201ENSMUST00000198200 1189 ntBASIC17.31■□□□□ 0.36
Scn5aQ9JJV9 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Scn5aQ9JJV9 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Scn5aQ9JJV9 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Scn5aQ9JJV9 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Scn5aQ9JJV9 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC17.31■□□□□ 0.36
Scn5aQ9JJV9 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Scn5aQ9JJV9 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Scn5aQ9JJV9 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Scn5aQ9JJV9 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Scn5aQ9JJV9 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Scn5aQ9JJV9 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC17.31■□□□□ 0.36
Scn5aQ9JJV9 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Scn5aQ9JJV9 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Scn5aQ9JJV9 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC17.3■□□□□ 0.36
Scn5aQ9JJV9 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Scn5aQ9JJV9 Gm11779-201ENSMUST00000118541 368 ntBASIC17.3■□□□□ 0.36
Scn5aQ9JJV9 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC17.3■□□□□ 0.36
Scn5aQ9JJV9 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC17.3■□□□□ 0.36
Scn5aQ9JJV9 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Scn5aQ9JJV9 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Scn5aQ9JJV9 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Scn5aQ9JJV9 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17.3■□□□□ 0.36
Scn5aQ9JJV9 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC17.3■□□□□ 0.36
Scn5aQ9JJV9 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Scn5aQ9JJV9 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Scn5aQ9JJV9 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Scn5aQ9JJV9 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Scn5aQ9JJV9 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Scn5aQ9JJV9 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Scn5aQ9JJV9 Tfap2a-209ENSMUST00000225180 1828 ntBASIC17.3■□□□□ 0.36
Scn5aQ9JJV9 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Scn5aQ9JJV9 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Scn5aQ9JJV9 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Scn5aQ9JJV9 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Scn5aQ9JJV9 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Scn5aQ9JJV9 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Scn5aQ9JJV9 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC17.29■□□□□ 0.36
Scn5aQ9JJV9 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Scn5aQ9JJV9 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC17.29■□□□□ 0.36
Scn5aQ9JJV9 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Scn5aQ9JJV9 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Scn5aQ9JJV9 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC17.29■□□□□ 0.36
Scn5aQ9JJV9 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Scn5aQ9JJV9 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Scn5aQ9JJV9 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Scn5aQ9JJV9 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Scn5aQ9JJV9 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Scn5aQ9JJV9 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Scn5aQ9JJV9 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
Scn5aQ9JJV9 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC17.28■□□□□ 0.36
Scn5aQ9JJV9 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Scn5aQ9JJV9 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Scn5aQ9JJV9 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC17.28■□□□□ 0.36
Scn5aQ9JJV9 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.28■□□□□ 0.36
Scn5aQ9JJV9 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Scn5aQ9JJV9 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Scn5aQ9JJV9 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Scn5aQ9JJV9 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Scn5aQ9JJV9 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Scn5aQ9JJV9 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Scn5aQ9JJV9 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Scn5aQ9JJV9 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Scn5aQ9JJV9 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC17.28■□□□□ 0.36
Scn5aQ9JJV9 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC17.28■□□□□ 0.36
Scn5aQ9JJV9 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC17.28■□□□□ 0.36
Scn5aQ9JJV9 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Scn5aQ9JJV9 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Scn5aQ9JJV9 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC17.28■□□□□ 0.36
Scn5aQ9JJV9 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
Scn5aQ9JJV9 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms