Protein–RNA interactions for Protein: Q9ES64

Ush1c, Harmonin, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1cQ9ES64 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ush1cQ9ES64 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC19.31■□□□□ 0.68
Ush1cQ9ES64 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC19.31■□□□□ 0.68
Ush1cQ9ES64 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ush1cQ9ES64 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ush1cQ9ES64 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ush1cQ9ES64 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ush1cQ9ES64 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ush1cQ9ES64 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Ush1cQ9ES64 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ush1cQ9ES64 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ush1cQ9ES64 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ush1cQ9ES64 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ush1cQ9ES64 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ush1cQ9ES64 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Ush1cQ9ES64 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ush1cQ9ES64 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC19.3■□□□□ 0.68
Ush1cQ9ES64 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC19.3■□□□□ 0.68
Ush1cQ9ES64 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ush1cQ9ES64 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ush1cQ9ES64 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ush1cQ9ES64 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC19.3■□□□□ 0.68
Ush1cQ9ES64 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ush1cQ9ES64 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
Ush1cQ9ES64 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC19.3■□□□□ 0.68
Ush1cQ9ES64 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ush1cQ9ES64 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ush1cQ9ES64 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ush1cQ9ES64 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ush1cQ9ES64 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC19.3■□□□□ 0.68
Ush1cQ9ES64 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ush1cQ9ES64 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ush1cQ9ES64 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Ush1cQ9ES64 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ush1cQ9ES64 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Ush1cQ9ES64 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ush1cQ9ES64 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ush1cQ9ES64 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ush1cQ9ES64 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ush1cQ9ES64 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ush1cQ9ES64 Gm16499-203ENSMUST00000204633 2177 ntBASIC19.29■□□□□ 0.68
Ush1cQ9ES64 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ush1cQ9ES64 Gm12933-201ENSMUST00000120203 872 ntBASIC19.29■□□□□ 0.68
Ush1cQ9ES64 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC19.29■□□□□ 0.68
Ush1cQ9ES64 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC19.29■□□□□ 0.68
Ush1cQ9ES64 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC19.29■□□□□ 0.68
Ush1cQ9ES64 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC19.29■□□□□ 0.68
Ush1cQ9ES64 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC19.29■□□□□ 0.68
Ush1cQ9ES64 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ush1cQ9ES64 Gm11620-201ENSMUST00000118770 1845 ntBASIC19.29■□□□□ 0.68
Ush1cQ9ES64 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
Ush1cQ9ES64 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ush1cQ9ES64 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ush1cQ9ES64 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ush1cQ9ES64 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ush1cQ9ES64 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ush1cQ9ES64 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ush1cQ9ES64 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ush1cQ9ES64 AC125311.2-201ENSMUST00000227477 1940 ntBASIC19.29■□□□□ 0.68
Ush1cQ9ES64 Gm45212-201ENSMUST00000205831 3403 ntBASIC19.29■□□□□ 0.68
Ush1cQ9ES64 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ush1cQ9ES64 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ush1cQ9ES64 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Ush1cQ9ES64 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ush1cQ9ES64 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ush1cQ9ES64 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Ush1cQ9ES64 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ush1cQ9ES64 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ush1cQ9ES64 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
Ush1cQ9ES64 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Ush1cQ9ES64 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC19.28■□□□□ 0.68
Ush1cQ9ES64 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Ush1cQ9ES64 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ush1cQ9ES64 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ush1cQ9ES64 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ush1cQ9ES64 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ush1cQ9ES64 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ush1cQ9ES64 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ush1cQ9ES64 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ush1cQ9ES64 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ush1cQ9ES64 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ush1cQ9ES64 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Ush1cQ9ES64 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ush1cQ9ES64 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ush1cQ9ES64 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Ush1cQ9ES64 Nespas-201ENSMUST00000143738 1083 ntBASIC19.27■□□□□ 0.68
Ush1cQ9ES64 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ush1cQ9ES64 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Ush1cQ9ES64 Gm10602-201ENSMUST00000098239 609 ntBASIC19.27■□□□□ 0.68
Ush1cQ9ES64 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ush1cQ9ES64 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ush1cQ9ES64 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC19.27■□□□□ 0.67
Ush1cQ9ES64 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC19.27■□□□□ 0.67
Ush1cQ9ES64 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Ush1cQ9ES64 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Ush1cQ9ES64 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Ush1cQ9ES64 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Ush1cQ9ES64 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ush1cQ9ES64 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC19.26■□□□□ 0.67
Ush1cQ9ES64 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 65.5 ms