Protein–RNA interactions for Protein: Q9D701

Upk3bl1, Uroplakin-3b-like protein 1, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bl1Q9D701 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Upk3bl1Q9D701 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Upk3bl1Q9D701 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC15.35■□□□□ 0.05
Upk3bl1Q9D701 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC15.35■□□□□ 0.05
Upk3bl1Q9D701 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Upk3bl1Q9D701 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Upk3bl1Q9D701 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Upk3bl1Q9D701 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Upk3bl1Q9D701 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Upk3bl1Q9D701 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC15.35■□□□□ 0.05
Upk3bl1Q9D701 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC15.34■□□□□ 0.05
Upk3bl1Q9D701 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Upk3bl1Q9D701 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC15.34■□□□□ 0.05
Upk3bl1Q9D701 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Upk3bl1Q9D701 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Upk3bl1Q9D701 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Upk3bl1Q9D701 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.05
Upk3bl1Q9D701 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Upk3bl1Q9D701 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Upk3bl1Q9D701 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Upk3bl1Q9D701 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Upk3bl1Q9D701 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Upk3bl1Q9D701 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Upk3bl1Q9D701 Gm38285-201ENSMUST00000192928 922 ntBASIC15.34■□□□□ 0.05
Upk3bl1Q9D701 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
Upk3bl1Q9D701 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC15.34■□□□□ 0.05
Upk3bl1Q9D701 Rpl7-201ENSMUST00000058437 1163 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Upk3bl1Q9D701 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Upk3bl1Q9D701 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Upk3bl1Q9D701 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Upk3bl1Q9D701 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Upk3bl1Q9D701 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Upk3bl1Q9D701 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Upk3bl1Q9D701 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Upk3bl1Q9D701 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Upk3bl1Q9D701 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC15.34■□□□□ 0.05
Upk3bl1Q9D701 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Upk3bl1Q9D701 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Upk3bl1Q9D701 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Upk3bl1Q9D701 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC15.33■□□□□ 0.05
Upk3bl1Q9D701 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Upk3bl1Q9D701 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
Upk3bl1Q9D701 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Upk3bl1Q9D701 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC15.33■□□□□ 0.04
Upk3bl1Q9D701 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Upk3bl1Q9D701 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Upk3bl1Q9D701 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Upk3bl1Q9D701 Gm6139-201ENSMUST00000079261 882 ntBASIC15.33■□□□□ 0.04
Upk3bl1Q9D701 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Upk3bl1Q9D701 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Upk3bl1Q9D701 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Upk3bl1Q9D701 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Upk3bl1Q9D701 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Upk3bl1Q9D701 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Upk3bl1Q9D701 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.04
Upk3bl1Q9D701 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Upk3bl1Q9D701 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Upk3bl1Q9D701 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Upk3bl1Q9D701 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Upk3bl1Q9D701 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Upk3bl1Q9D701 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Upk3bl1Q9D701 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Upk3bl1Q9D701 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Upk3bl1Q9D701 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Upk3bl1Q9D701 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Upk3bl1Q9D701 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Upk3bl1Q9D701 Nespas-201ENSMUST00000143738 1083 ntBASIC15.32■□□□□ 0.04
Upk3bl1Q9D701 Gm27454-201ENSMUST00000185090 204 ntBASIC15.32■□□□□ 0.04
Upk3bl1Q9D701 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Upk3bl1Q9D701 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Upk3bl1Q9D701 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC15.32■□□□□ 0.04
Upk3bl1Q9D701 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Upk3bl1Q9D701 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Upk3bl1Q9D701 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Upk3bl1Q9D701 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Upk3bl1Q9D701 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Upk3bl1Q9D701 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Upk3bl1Q9D701 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Upk3bl1Q9D701 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Upk3bl1Q9D701 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Upk3bl1Q9D701 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Upk3bl1Q9D701 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Upk3bl1Q9D701 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Upk3bl1Q9D701 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Upk3bl1Q9D701 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Upk3bl1Q9D701 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Upk3bl1Q9D701 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Upk3bl1Q9D701 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Upk3bl1Q9D701 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Upk3bl1Q9D701 Gm6420-201ENSMUST00000193885 723 ntBASIC15.31■□□□□ 0.04
Upk3bl1Q9D701 AC154532.1-201ENSMUST00000227860 965 ntBASIC15.31■□□□□ 0.04
Upk3bl1Q9D701 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Upk3bl1Q9D701 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC15.31■□□□□ 0.04
Upk3bl1Q9D701 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Upk3bl1Q9D701 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Upk3bl1Q9D701 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Upk3bl1Q9D701 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Upk3bl1Q9D701 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Upk3bl1Q9D701 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Upk3bl1Q9D701 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms