Protein–RNA interactions for Protein: Q9D6Z1

Nop56, Nucleolar protein 56, mousemouse

Known RBP Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nop56Q9D6Z1 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nop56Q9D6Z1 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Nop56Q9D6Z1 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nop56Q9D6Z1 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Nop56Q9D6Z1 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nop56Q9D6Z1 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Nop56Q9D6Z1 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
Nop56Q9D6Z1 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC17.39■□□□□ 0.37
Nop56Q9D6Z1 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Nop56Q9D6Z1 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nop56Q9D6Z1 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nop56Q9D6Z1 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nop56Q9D6Z1 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nop56Q9D6Z1 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nop56Q9D6Z1 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Nop56Q9D6Z1 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
Nop56Q9D6Z1 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC17.38■□□□□ 0.37
Nop56Q9D6Z1 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nop56Q9D6Z1 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Nop56Q9D6Z1 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nop56Q9D6Z1 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nop56Q9D6Z1 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Nop56Q9D6Z1 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Nop56Q9D6Z1 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Nop56Q9D6Z1 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Nop56Q9D6Z1 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC17.38■□□□□ 0.37
Nop56Q9D6Z1 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nop56Q9D6Z1 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Nop56Q9D6Z1 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nop56Q9D6Z1 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nop56Q9D6Z1 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nop56Q9D6Z1 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nop56Q9D6Z1 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nop56Q9D6Z1 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Nop56Q9D6Z1 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC17.37■□□□□ 0.37
Nop56Q9D6Z1 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Nop56Q9D6Z1 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nop56Q9D6Z1 Gm11927-201ENSMUST00000118472 759 ntBASIC17.37■□□□□ 0.37
Nop56Q9D6Z1 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC17.37■□□□□ 0.37
Nop56Q9D6Z1 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Nop56Q9D6Z1 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nop56Q9D6Z1 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC17.37■□□□□ 0.37
Nop56Q9D6Z1 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
Nop56Q9D6Z1 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nop56Q9D6Z1 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC17.37■□□□□ 0.37
Nop56Q9D6Z1 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nop56Q9D6Z1 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Nop56Q9D6Z1 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nop56Q9D6Z1 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nop56Q9D6Z1 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nop56Q9D6Z1 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC17.36■□□□□ 0.37
Nop56Q9D6Z1 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nop56Q9D6Z1 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nop56Q9D6Z1 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nop56Q9D6Z1 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nop56Q9D6Z1 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nop56Q9D6Z1 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nop56Q9D6Z1 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC17.36■□□□□ 0.37
Nop56Q9D6Z1 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nop56Q9D6Z1 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Nop56Q9D6Z1 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC17.36■□□□□ 0.37
Nop56Q9D6Z1 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Nop56Q9D6Z1 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Nop56Q9D6Z1 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC17.36■□□□□ 0.37
Nop56Q9D6Z1 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Nop56Q9D6Z1 Gm37812-201ENSMUST00000195216 2475 ntBASIC17.36■□□□□ 0.37
Nop56Q9D6Z1 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC17.35■□□□□ 0.37
Nop56Q9D6Z1 Gm14026-201ENSMUST00000120625 1789 ntBASIC17.35■□□□□ 0.37
Nop56Q9D6Z1 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nop56Q9D6Z1 Tfap2a-209ENSMUST00000225180 1828 ntBASIC17.35■□□□□ 0.37
Nop56Q9D6Z1 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nop56Q9D6Z1 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nop56Q9D6Z1 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nop56Q9D6Z1 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nop56Q9D6Z1 Gm11643-201ENSMUST00000119578 864 ntBASIC17.35■□□□□ 0.37
Nop56Q9D6Z1 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nop56Q9D6Z1 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Nop56Q9D6Z1 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nop56Q9D6Z1 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nop56Q9D6Z1 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nop56Q9D6Z1 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nop56Q9D6Z1 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nop56Q9D6Z1 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nop56Q9D6Z1 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nop56Q9D6Z1 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nop56Q9D6Z1 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nop56Q9D6Z1 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nop56Q9D6Z1 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Nop56Q9D6Z1 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nop56Q9D6Z1 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Nop56Q9D6Z1 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nop56Q9D6Z1 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nop56Q9D6Z1 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC17.34■□□□□ 0.37
Nop56Q9D6Z1 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Nop56Q9D6Z1 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Nop56Q9D6Z1 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nop56Q9D6Z1 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC17.34■□□□□ 0.37
Nop56Q9D6Z1 Gm26524-201ENSMUST00000192339 390 ntBASIC17.34■□□□□ 0.37
Nop56Q9D6Z1 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Nop56Q9D6Z1 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC17.34■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms