Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC18.25■□□□□ 0.51
Ssr1Q9CY50 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Ssr1Q9CY50 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ssr1Q9CY50 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ssr1Q9CY50 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ssr1Q9CY50 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ssr1Q9CY50 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Ssr1Q9CY50 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ssr1Q9CY50 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ssr1Q9CY50 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ssr1Q9CY50 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ssr1Q9CY50 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Ssr1Q9CY50 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ssr1Q9CY50 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Ssr1Q9CY50 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ssr1Q9CY50 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC18.24■□□□□ 0.51
Ssr1Q9CY50 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC18.24■□□□□ 0.51
Ssr1Q9CY50 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ssr1Q9CY50 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC18.24■□□□□ 0.51
Ssr1Q9CY50 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ssr1Q9CY50 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ssr1Q9CY50 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ssr1Q9CY50 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ssr1Q9CY50 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Ssr1Q9CY50 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ssr1Q9CY50 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC18.24■□□□□ 0.51
Ssr1Q9CY50 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Ssr1Q9CY50 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ssr1Q9CY50 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ssr1Q9CY50 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ssr1Q9CY50 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ssr1Q9CY50 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Ssr1Q9CY50 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Ssr1Q9CY50 Gm18666-201ENSMUST00000190039 958 ntBASIC18.23■□□□□ 0.51
Ssr1Q9CY50 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC18.23■□□□□ 0.51
Ssr1Q9CY50 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ssr1Q9CY50 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Ssr1Q9CY50 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ssr1Q9CY50 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ssr1Q9CY50 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
Ssr1Q9CY50 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Ssr1Q9CY50 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Ssr1Q9CY50 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ssr1Q9CY50 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Ssr1Q9CY50 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ssr1Q9CY50 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ssr1Q9CY50 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ssr1Q9CY50 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ssr1Q9CY50 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC18.22■□□□□ 0.51
Ssr1Q9CY50 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC18.22■□□□□ 0.51
Ssr1Q9CY50 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC18.22■□□□□ 0.51
Ssr1Q9CY50 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC18.22■□□□□ 0.51
Ssr1Q9CY50 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ssr1Q9CY50 Gm37856-201ENSMUST00000191634 999 ntBASIC18.22■□□□□ 0.51
Ssr1Q9CY50 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ssr1Q9CY50 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC18.22■□□□□ 0.51
Ssr1Q9CY50 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ssr1Q9CY50 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ssr1Q9CY50 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC18.22■□□□□ 0.51
Ssr1Q9CY50 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Ssr1Q9CY50 Nrn1-203ENSMUST00000223611 1443 ntBASIC18.22■□□□□ 0.51
Ssr1Q9CY50 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Ssr1Q9CY50 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Ssr1Q9CY50 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ssr1Q9CY50 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ssr1Q9CY50 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ssr1Q9CY50 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ssr1Q9CY50 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Ssr1Q9CY50 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ssr1Q9CY50 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ssr1Q9CY50 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC18.21■□□□□ 0.51
Ssr1Q9CY50 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC18.21■□□□□ 0.51
Ssr1Q9CY50 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
Ssr1Q9CY50 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ssr1Q9CY50 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ssr1Q9CY50 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ssr1Q9CY50 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ssr1Q9CY50 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ssr1Q9CY50 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ssr1Q9CY50 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ssr1Q9CY50 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ssr1Q9CY50 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ssr1Q9CY50 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC18.21■□□□□ 0.51
Ssr1Q9CY50 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
Ssr1Q9CY50 Gm37292-201ENSMUST00000192062 758 ntBASIC18.21■□□□□ 0.51
Ssr1Q9CY50 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Ssr1Q9CY50 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ssr1Q9CY50 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
Ssr1Q9CY50 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Ssr1Q9CY50 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ssr1Q9CY50 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Ssr1Q9CY50 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ssr1Q9CY50 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ssr1Q9CY50 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ssr1Q9CY50 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ssr1Q9CY50 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ssr1Q9CY50 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Ssr1Q9CY50 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ssr1Q9CY50 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Ssr1Q9CY50 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms