Protein–RNA interactions for Protein: Q9CR29

Ccdc43, Coiled-coil domain-containing protein 43, mousemouse

Known RBP Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc43Q9CR29 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ccdc43Q9CR29 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
Ccdc43Q9CR29 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC18.7■□□□□ 0.58
Ccdc43Q9CR29 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC18.7■□□□□ 0.58
Ccdc43Q9CR29 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ccdc43Q9CR29 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Ccdc43Q9CR29 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ccdc43Q9CR29 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ccdc43Q9CR29 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Ccdc43Q9CR29 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
Ccdc43Q9CR29 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC18.69■□□□□ 0.58
Ccdc43Q9CR29 Gm12085-201ENSMUST00000119263 940 ntBASIC18.69■□□□□ 0.58
Ccdc43Q9CR29 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ccdc43Q9CR29 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ccdc43Q9CR29 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC18.69■□□□□ 0.58
Ccdc43Q9CR29 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ccdc43Q9CR29 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Ccdc43Q9CR29 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC18.69■□□□□ 0.58
Ccdc43Q9CR29 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ccdc43Q9CR29 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ccdc43Q9CR29 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Ccdc43Q9CR29 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ccdc43Q9CR29 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ccdc43Q9CR29 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ccdc43Q9CR29 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ccdc43Q9CR29 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ccdc43Q9CR29 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ccdc43Q9CR29 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ccdc43Q9CR29 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Ccdc43Q9CR29 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
Ccdc43Q9CR29 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Ccdc43Q9CR29 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Ccdc43Q9CR29 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Ccdc43Q9CR29 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Ccdc43Q9CR29 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ccdc43Q9CR29 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ccdc43Q9CR29 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Ccdc43Q9CR29 Gm5297-201ENSMUST00000198555 1171 ntBASIC18.68■□□□□ 0.58
Ccdc43Q9CR29 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ccdc43Q9CR29 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ccdc43Q9CR29 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ccdc43Q9CR29 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Ccdc43Q9CR29 Gm7712-202ENSMUST00000222331 1510 ntBASIC18.68■□□□□ 0.58
Ccdc43Q9CR29 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Ccdc43Q9CR29 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Ccdc43Q9CR29 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ccdc43Q9CR29 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ccdc43Q9CR29 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Ccdc43Q9CR29 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ccdc43Q9CR29 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC18.67■□□□□ 0.58
Ccdc43Q9CR29 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ccdc43Q9CR29 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ccdc43Q9CR29 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC18.67■□□□□ 0.58
Ccdc43Q9CR29 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ccdc43Q9CR29 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC18.67■□□□□ 0.58
Ccdc43Q9CR29 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC18.67■□□□□ 0.58
Ccdc43Q9CR29 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ccdc43Q9CR29 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ccdc43Q9CR29 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ccdc43Q9CR29 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ccdc43Q9CR29 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ccdc43Q9CR29 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Ccdc43Q9CR29 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ccdc43Q9CR29 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ccdc43Q9CR29 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc43Q9CR29 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Ccdc43Q9CR29 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Ccdc43Q9CR29 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc43Q9CR29 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc43Q9CR29 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc43Q9CR29 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC18.66■□□□□ 0.58
Ccdc43Q9CR29 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc43Q9CR29 Gm37025-201ENSMUST00000195159 829 ntBASIC18.66■□□□□ 0.58
Ccdc43Q9CR29 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC18.66■□□□□ 0.58
Ccdc43Q9CR29 AC175538.1-201ENSMUST00000225343 1269 ntBASIC18.66■□□□□ 0.58
Ccdc43Q9CR29 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc43Q9CR29 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc43Q9CR29 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Ccdc43Q9CR29 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc43Q9CR29 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc43Q9CR29 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc43Q9CR29 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc43Q9CR29 Gm45412-201ENSMUST00000210217 2275 ntBASIC18.66■□□□□ 0.58
Ccdc43Q9CR29 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc43Q9CR29 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc43Q9CR29 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc43Q9CR29 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc43Q9CR29 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc43Q9CR29 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc43Q9CR29 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc43Q9CR29 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc43Q9CR29 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc43Q9CR29 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc43Q9CR29 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc43Q9CR29 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc43Q9CR29 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc43Q9CR29 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC18.65■□□□□ 0.58
Ccdc43Q9CR29 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Ccdc43Q9CR29 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc43Q9CR29 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms