Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 Gm38116-201ENSMUST00000193873 1533 ntBASIC16.9■□□□□ 0.3
Retreg3Q9CQV4 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retreg3Q9CQV4 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retreg3Q9CQV4 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Retreg3Q9CQV4 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Retreg3Q9CQV4 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.3
Retreg3Q9CQV4 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC16.89■□□□□ 0.29
Retreg3Q9CQV4 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Retreg3Q9CQV4 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Retreg3Q9CQV4 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retreg3Q9CQV4 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retreg3Q9CQV4 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retreg3Q9CQV4 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Retreg3Q9CQV4 Mir5130-201ENSMUST00000175160 84 ntBASIC16.89■□□□□ 0.29
Retreg3Q9CQV4 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC16.89■□□□□ 0.29
Retreg3Q9CQV4 Gm45058-201ENSMUST00000205810 766 ntBASIC16.89■□□□□ 0.29
Retreg3Q9CQV4 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retreg3Q9CQV4 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
Retreg3Q9CQV4 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retreg3Q9CQV4 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retreg3Q9CQV4 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC16.89■□□□□ 0.29
Retreg3Q9CQV4 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retreg3Q9CQV4 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retreg3Q9CQV4 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retreg3Q9CQV4 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retreg3Q9CQV4 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Retreg3Q9CQV4 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retreg3Q9CQV4 Gm36858-201ENSMUST00000194501 2391 ntBASIC16.88■□□□□ 0.29
Retreg3Q9CQV4 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Retreg3Q9CQV4 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retreg3Q9CQV4 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Retreg3Q9CQV4 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retreg3Q9CQV4 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retreg3Q9CQV4 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Retreg3Q9CQV4 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Retreg3Q9CQV4 Actl10-202ENSMUST00000226583 1501 ntBASIC16.88■□□□□ 0.29
Retreg3Q9CQV4 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retreg3Q9CQV4 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC16.88■□□□□ 0.29
Retreg3Q9CQV4 Gm37083-201ENSMUST00000195784 711 ntTSL 2 BASIC16.88■□□□□ 0.29
Retreg3Q9CQV4 Gm31048-201ENSMUST00000196103 1061 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Retreg3Q9CQV4 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC16.88■□□□□ 0.29
Retreg3Q9CQV4 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC16.88■□□□□ 0.29
Retreg3Q9CQV4 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retreg3Q9CQV4 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retreg3Q9CQV4 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Retreg3Q9CQV4 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retreg3Q9CQV4 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Retreg3Q9CQV4 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retreg3Q9CQV4 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retreg3Q9CQV4 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Retreg3Q9CQV4 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retreg3Q9CQV4 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Retreg3Q9CQV4 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retreg3Q9CQV4 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retreg3Q9CQV4 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retreg3Q9CQV4 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retreg3Q9CQV4 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retreg3Q9CQV4 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retreg3Q9CQV4 Gm12106-201ENSMUST00000116006 1200 ntBASIC16.87■□□□□ 0.29
Retreg3Q9CQV4 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC16.87■□□□□ 0.29
Retreg3Q9CQV4 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Retreg3Q9CQV4 Gm23634-201ENSMUST00000175071 91 ntBASIC16.87■□□□□ 0.29
Retreg3Q9CQV4 Gm20865-201ENSMUST00000179095 856 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Retreg3Q9CQV4 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC16.87■□□□□ 0.29
Retreg3Q9CQV4 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retreg3Q9CQV4 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retreg3Q9CQV4 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retreg3Q9CQV4 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retreg3Q9CQV4 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retreg3Q9CQV4 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retreg3Q9CQV4 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Retreg3Q9CQV4 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retreg3Q9CQV4 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retreg3Q9CQV4 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retreg3Q9CQV4 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Retreg3Q9CQV4 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Retreg3Q9CQV4 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Retreg3Q9CQV4 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Retreg3Q9CQV4 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Retreg3Q9CQV4 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Retreg3Q9CQV4 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
Retreg3Q9CQV4 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Retreg3Q9CQV4 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC16.86■□□□□ 0.29
Retreg3Q9CQV4 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Retreg3Q9CQV4 Gm7213-201ENSMUST00000215977 950 ntBASIC16.86■□□□□ 0.29
Retreg3Q9CQV4 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Retreg3Q9CQV4 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Retreg3Q9CQV4 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Retreg3Q9CQV4 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Retreg3Q9CQV4 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Retreg3Q9CQV4 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Retreg3Q9CQV4 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Retreg3Q9CQV4 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Retreg3Q9CQV4 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC16.86■□□□□ 0.29
Retreg3Q9CQV4 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Retreg3Q9CQV4 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Retreg3Q9CQV4 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Retreg3Q9CQV4 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Retreg3Q9CQV4 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Retreg3Q9CQV4 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms