Protein–RNA interactions for Protein: Q99P47

Cntnap4, Contactin-associated protein-like 4, mousemouse

Predictions only

Length 1,310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntnap4Q99P47 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Cntnap4Q99P47 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cntnap4Q99P47 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Cntnap4Q99P47 Gm17807-201ENSMUST00000186869 298 ntBASIC17.99■□□□□ 0.47
Cntnap4Q99P47 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cntnap4Q99P47 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cntnap4Q99P47 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cntnap4Q99P47 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cntnap4Q99P47 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Cntnap4Q99P47 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Cntnap4Q99P47 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cntnap4Q99P47 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cntnap4Q99P47 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Cntnap4Q99P47 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cntnap4Q99P47 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cntnap4Q99P47 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cntnap4Q99P47 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Cntnap4Q99P47 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cntnap4Q99P47 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Cntnap4Q99P47 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Cntnap4Q99P47 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cntnap4Q99P47 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Cntnap4Q99P47 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cntnap4Q99P47 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC17.99■□□□□ 0.47
Cntnap4Q99P47 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cntnap4Q99P47 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cntnap4Q99P47 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC17.99■□□□□ 0.47
Cntnap4Q99P47 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cntnap4Q99P47 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cntnap4Q99P47 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cntnap4Q99P47 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cntnap4Q99P47 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cntnap4Q99P47 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cntnap4Q99P47 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cntnap4Q99P47 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cntnap4Q99P47 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cntnap4Q99P47 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cntnap4Q99P47 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC17.98■□□□□ 0.47
Cntnap4Q99P47 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cntnap4Q99P47 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cntnap4Q99P47 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cntnap4Q99P47 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
Cntnap4Q99P47 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Cntnap4Q99P47 Phf7-203ENSMUST00000226565 1971 ntBASIC17.98■□□□□ 0.47
Cntnap4Q99P47 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Cntnap4Q99P47 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Cntnap4Q99P47 Wnt10b-204ENSMUST00000226655 1807 ntBASIC17.98■□□□□ 0.47
Cntnap4Q99P47 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cntnap4Q99P47 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Cntnap4Q99P47 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cntnap4Q99P47 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cntnap4Q99P47 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cntnap4Q99P47 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Cntnap4Q99P47 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cntnap4Q99P47 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Cntnap4Q99P47 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cntnap4Q99P47 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cntnap4Q99P47 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cntnap4Q99P47 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cntnap4Q99P47 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cntnap4Q99P47 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cntnap4Q99P47 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cntnap4Q99P47 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cntnap4Q99P47 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cntnap4Q99P47 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cntnap4Q99P47 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Cntnap4Q99P47 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC17.97■□□□□ 0.47
Cntnap4Q99P47 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Cntnap4Q99P47 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Cntnap4Q99P47 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Cntnap4Q99P47 Gm37935-201ENSMUST00000192012 982 ntBASIC17.97■□□□□ 0.47
Cntnap4Q99P47 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cntnap4Q99P47 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC17.97■□□□□ 0.47
Cntnap4Q99P47 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cntnap4Q99P47 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cntnap4Q99P47 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cntnap4Q99P47 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cntnap4Q99P47 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Cntnap4Q99P47 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cntnap4Q99P47 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cntnap4Q99P47 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Cntnap4Q99P47 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC17.96■□□□□ 0.47
Cntnap4Q99P47 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Cntnap4Q99P47 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Cntnap4Q99P47 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cntnap4Q99P47 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cntnap4Q99P47 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cntnap4Q99P47 Gm11336-201ENSMUST00000118168 334 ntBASIC17.96■□□□□ 0.46
Cntnap4Q99P47 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC17.96■□□□□ 0.46
Cntnap4Q99P47 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC17.96■□□□□ 0.46
Cntnap4Q99P47 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cntnap4Q99P47 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cntnap4Q99P47 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cntnap4Q99P47 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Cntnap4Q99P47 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cntnap4Q99P47 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Cntnap4Q99P47 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cntnap4Q99P47 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cntnap4Q99P47 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cntnap4Q99P47 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms