Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Smc1bQ920F6 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smc1bQ920F6 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Smc1bQ920F6 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smc1bQ920F6 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smc1bQ920F6 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smc1bQ920F6 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Smc1bQ920F6 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smc1bQ920F6 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Smc1bQ920F6 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC19.35■□□□□ 0.69
Smc1bQ920F6 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC19.35■□□□□ 0.69
Smc1bQ920F6 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC19.35■□□□□ 0.69
Smc1bQ920F6 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC19.35■□□□□ 0.69
Smc1bQ920F6 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC19.35■□□□□ 0.69
Smc1bQ920F6 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Smc1bQ920F6 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Smc1bQ920F6 AC164629.2-201ENSMUST00000217916 270 ntBASIC19.35■□□□□ 0.69
Smc1bQ920F6 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smc1bQ920F6 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smc1bQ920F6 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC19.35■□□□□ 0.69
Smc1bQ920F6 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smc1bQ920F6 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Smc1bQ920F6 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC19.35■□□□□ 0.69
Smc1bQ920F6 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smc1bQ920F6 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smc1bQ920F6 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smc1bQ920F6 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smc1bQ920F6 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Smc1bQ920F6 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC19.34■□□□□ 0.69
Smc1bQ920F6 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Smc1bQ920F6 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
Smc1bQ920F6 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC19.34■□□□□ 0.69
Smc1bQ920F6 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Smc1bQ920F6 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smc1bQ920F6 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smc1bQ920F6 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smc1bQ920F6 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Smc1bQ920F6 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Smc1bQ920F6 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Smc1bQ920F6 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smc1bQ920F6 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Smc1bQ920F6 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Smc1bQ920F6 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Smc1bQ920F6 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Smc1bQ920F6 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Smc1bQ920F6 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Smc1bQ920F6 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Smc1bQ920F6 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Smc1bQ920F6 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Smc1bQ920F6 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Smc1bQ920F6 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC19.33■□□□□ 0.68
Smc1bQ920F6 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Smc1bQ920F6 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Smc1bQ920F6 Gm8969-201ENSMUST00000199694 526 ntBASIC19.33■□□□□ 0.68
Smc1bQ920F6 Il3ra-202ENSMUST00000223589 738 ntBASIC19.33■□□□□ 0.68
Smc1bQ920F6 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC19.33■□□□□ 0.68
Smc1bQ920F6 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC19.33■□□□□ 0.68
Smc1bQ920F6 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Smc1bQ920F6 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Smc1bQ920F6 Gm45412-201ENSMUST00000210217 2275 ntBASIC19.33■□□□□ 0.68
Smc1bQ920F6 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
Smc1bQ920F6 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Smc1bQ920F6 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smc1bQ920F6 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smc1bQ920F6 Gm43338-201ENSMUST00000198617 2223 ntBASIC19.32■□□□□ 0.68
Smc1bQ920F6 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smc1bQ920F6 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smc1bQ920F6 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Smc1bQ920F6 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smc1bQ920F6 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smc1bQ920F6 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Smc1bQ920F6 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC19.32■□□□□ 0.68
Smc1bQ920F6 Gm28659-201ENSMUST00000188013 759 ntBASIC19.32■□□□□ 0.68
Smc1bQ920F6 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Smc1bQ920F6 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smc1bQ920F6 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smc1bQ920F6 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC19.32■□□□□ 0.68
Smc1bQ920F6 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smc1bQ920F6 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smc1bQ920F6 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smc1bQ920F6 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Smc1bQ920F6 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smc1bQ920F6 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC19.31■□□□□ 0.68
Smc1bQ920F6 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smc1bQ920F6 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC19.31■□□□□ 0.68
Smc1bQ920F6 Gm26039-201ENSMUST00000158152 144 ntBASIC19.31■□□□□ 0.68
Smc1bQ920F6 Gm6623-201ENSMUST00000173570 544 ntBASIC19.31■□□□□ 0.68
Smc1bQ920F6 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Smc1bQ920F6 Gm34391-201ENSMUST00000203706 907 ntBASIC19.31■□□□□ 0.68
Smc1bQ920F6 Gm9731-201ENSMUST00000209480 747 ntBASIC19.31■□□□□ 0.68
Smc1bQ920F6 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Smc1bQ920F6 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smc1bQ920F6 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smc1bQ920F6 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smc1bQ920F6 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Smc1bQ920F6 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smc1bQ920F6 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Smc1bQ920F6 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Smc1bQ920F6 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Smc1bQ920F6 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms