Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb4Q91XZ6 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb4Q91XZ6 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb4Q91XZ6 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb4Q91XZ6 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Pcdhb4Q91XZ6 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb4Q91XZ6 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb4Q91XZ6 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb4Q91XZ6 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC16.71■□□□□ 0.27
Pcdhb4Q91XZ6 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Pcdhb4Q91XZ6 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Pcdhb4Q91XZ6 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
Pcdhb4Q91XZ6 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb4Q91XZ6 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb4Q91XZ6 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb4Q91XZ6 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb4Q91XZ6 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb4Q91XZ6 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb4Q91XZ6 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb4Q91XZ6 Gm14026-201ENSMUST00000120625 1789 ntBASIC16.7■□□□□ 0.26
Pcdhb4Q91XZ6 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC16.7■□□□□ 0.26
Pcdhb4Q91XZ6 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb4Q91XZ6 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb4Q91XZ6 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb4Q91XZ6 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
Pcdhb4Q91XZ6 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb4Q91XZ6 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Pcdhb4Q91XZ6 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb4Q91XZ6 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb4Q91XZ6 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb4Q91XZ6 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb4Q91XZ6 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Pcdhb4Q91XZ6 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC16.69■□□□□ 0.26
Pcdhb4Q91XZ6 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Pcdhb4Q91XZ6 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Pcdhb4Q91XZ6 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Pcdhb4Q91XZ6 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb4Q91XZ6 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Pcdhb4Q91XZ6 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC16.69■□□□□ 0.26
Pcdhb4Q91XZ6 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb4Q91XZ6 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC16.69■□□□□ 0.26
Pcdhb4Q91XZ6 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb4Q91XZ6 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb4Q91XZ6 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb4Q91XZ6 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb4Q91XZ6 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Pcdhb4Q91XZ6 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
Pcdhb4Q91XZ6 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb4Q91XZ6 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb4Q91XZ6 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb4Q91XZ6 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Pcdhb4Q91XZ6 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC16.68■□□□□ 0.26
Pcdhb4Q91XZ6 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb4Q91XZ6 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Pcdhb4Q91XZ6 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb4Q91XZ6 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb4Q91XZ6 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb4Q91XZ6 Gm13168-201ENSMUST00000121771 632 ntBASIC16.68■□□□□ 0.26
Pcdhb4Q91XZ6 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC16.68■□□□□ 0.26
Pcdhb4Q91XZ6 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC16.68■□□□□ 0.26
Pcdhb4Q91XZ6 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb4Q91XZ6 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb4Q91XZ6 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
Pcdhb4Q91XZ6 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb4Q91XZ6 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb4Q91XZ6 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC16.68■□□□□ 0.26
Pcdhb4Q91XZ6 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb4Q91XZ6 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb4Q91XZ6 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb4Q91XZ6 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb4Q91XZ6 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb4Q91XZ6 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb4Q91XZ6 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC16.67■□□□□ 0.26
Pcdhb4Q91XZ6 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb4Q91XZ6 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb4Q91XZ6 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb4Q91XZ6 Gm11620-201ENSMUST00000118770 1845 ntBASIC16.67■□□□□ 0.26
Pcdhb4Q91XZ6 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb4Q91XZ6 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Pcdhb4Q91XZ6 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Pcdhb4Q91XZ6 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb4Q91XZ6 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC16.67■□□□□ 0.26
Pcdhb4Q91XZ6 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb4Q91XZ6 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
Pcdhb4Q91XZ6 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC16.67■□□□□ 0.26
Pcdhb4Q91XZ6 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb4Q91XZ6 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb4Q91XZ6 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC16.66■□□□□ 0.26
Pcdhb4Q91XZ6 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb4Q91XZ6 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb4Q91XZ6 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb4Q91XZ6 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb4Q91XZ6 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb4Q91XZ6 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb4Q91XZ6 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC16.66■□□□□ 0.26
Pcdhb4Q91XZ6 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
Pcdhb4Q91XZ6 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb4Q91XZ6 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb4Q91XZ6 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb4Q91XZ6 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms