Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC17.26■□□□□ 0.35
Pcdhb6Q91XZ4 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC17.26■□□□□ 0.35
Pcdhb6Q91XZ4 Gm29994-201ENSMUST00000195495 1193 ntBASIC17.26■□□□□ 0.35
Pcdhb6Q91XZ4 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhb6Q91XZ4 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhb6Q91XZ4 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhb6Q91XZ4 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhb6Q91XZ4 Gm6190-201ENSMUST00000220683 1374 ntBASIC17.26■□□□□ 0.35
Pcdhb6Q91XZ4 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhb6Q91XZ4 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhb6Q91XZ4 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhb6Q91XZ4 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhb6Q91XZ4 Spsb2-203ENSMUST00000112473 1322 ntBASIC17.25■□□□□ 0.35
Pcdhb6Q91XZ4 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhb6Q91XZ4 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhb6Q91XZ4 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhb6Q91XZ4 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhb6Q91XZ4 Gm13474-201ENSMUST00000122466 815 ntBASIC17.25■□□□□ 0.35
Pcdhb6Q91XZ4 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC17.25■□□□□ 0.35
Pcdhb6Q91XZ4 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC17.25■□□□□ 0.35
Pcdhb6Q91XZ4 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhb6Q91XZ4 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Pcdhb6Q91XZ4 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhb6Q91XZ4 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
Pcdhb6Q91XZ4 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhb6Q91XZ4 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhb6Q91XZ4 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhb6Q91XZ4 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhb6Q91XZ4 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhb6Q91XZ4 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhb6Q91XZ4 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhb6Q91XZ4 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhb6Q91XZ4 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhb6Q91XZ4 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhb6Q91XZ4 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhb6Q91XZ4 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhb6Q91XZ4 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhb6Q91XZ4 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhb6Q91XZ4 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhb6Q91XZ4 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhb6Q91XZ4 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhb6Q91XZ4 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhb6Q91XZ4 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Pcdhb6Q91XZ4 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC17.24■□□□□ 0.35
Pcdhb6Q91XZ4 Gm43799-201ENSMUST00000201845 579 ntBASIC17.24■□□□□ 0.35
Pcdhb6Q91XZ4 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC17.24■□□□□ 0.35
Pcdhb6Q91XZ4 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhb6Q91XZ4 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC17.24■□□□□ 0.35
Pcdhb6Q91XZ4 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhb6Q91XZ4 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Pcdhb6Q91XZ4 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC17.24■□□□□ 0.35
Pcdhb6Q91XZ4 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhb6Q91XZ4 Actl10-202ENSMUST00000226583 1501 ntBASIC17.24■□□□□ 0.35
Pcdhb6Q91XZ4 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhb6Q91XZ4 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhb6Q91XZ4 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhb6Q91XZ4 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhb6Q91XZ4 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhb6Q91XZ4 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhb6Q91XZ4 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhb6Q91XZ4 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhb6Q91XZ4 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhb6Q91XZ4 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhb6Q91XZ4 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhb6Q91XZ4 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Pcdhb6Q91XZ4 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhb6Q91XZ4 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhb6Q91XZ4 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhb6Q91XZ4 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhb6Q91XZ4 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
Pcdhb6Q91XZ4 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhb6Q91XZ4 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhb6Q91XZ4 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC17.23■□□□□ 0.35
Pcdhb6Q91XZ4 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhb6Q91XZ4 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC17.23■□□□□ 0.35
Pcdhb6Q91XZ4 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC17.23■□□□□ 0.35
Pcdhb6Q91XZ4 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhb6Q91XZ4 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Pcdhb6Q91XZ4 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhb6Q91XZ4 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhb6Q91XZ4 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhb6Q91XZ4 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhb6Q91XZ4 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhb6Q91XZ4 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhb6Q91XZ4 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhb6Q91XZ4 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhb6Q91XZ4 Gm26596-201ENSMUST00000180464 2655 ntBASIC17.23■□□□□ 0.35
Pcdhb6Q91XZ4 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC17.22■□□□□ 0.35
Pcdhb6Q91XZ4 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhb6Q91XZ4 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhb6Q91XZ4 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhb6Q91XZ4 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Pcdhb6Q91XZ4 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhb6Q91XZ4 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhb6Q91XZ4 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhb6Q91XZ4 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Pcdhb6Q91XZ4 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhb6Q91XZ4 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhb6Q91XZ4 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Pcdhb6Q91XZ4 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms