Protein–RNA interactions for Protein: Q8VIJ6

Sfpq, Splicing factor, proline- and glutamine-rich, mousemouse

Known RBP Predictions only

Length 699 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SfpqQ8VIJ6 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SfpqQ8VIJ6 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC17.78■□□□□ 0.44
SfpqQ8VIJ6 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SfpqQ8VIJ6 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC17.78■□□□□ 0.44
SfpqQ8VIJ6 Gm18025-201ENSMUST00000221733 862 ntBASIC17.78■□□□□ 0.44
SfpqQ8VIJ6 AC107711.5-202ENSMUST00000226429 702 ntBASIC17.78■□□□□ 0.44
SfpqQ8VIJ6 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SfpqQ8VIJ6 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SfpqQ8VIJ6 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SfpqQ8VIJ6 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SfpqQ8VIJ6 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC17.78■□□□□ 0.44
SfpqQ8VIJ6 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SfpqQ8VIJ6 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SfpqQ8VIJ6 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC17.78■□□□□ 0.44
SfpqQ8VIJ6 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SfpqQ8VIJ6 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SfpqQ8VIJ6 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SfpqQ8VIJ6 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SfpqQ8VIJ6 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SfpqQ8VIJ6 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SfpqQ8VIJ6 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SfpqQ8VIJ6 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SfpqQ8VIJ6 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SfpqQ8VIJ6 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
SfpqQ8VIJ6 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SfpqQ8VIJ6 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
SfpqQ8VIJ6 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
SfpqQ8VIJ6 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
SfpqQ8VIJ6 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
SfpqQ8VIJ6 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC17.77■□□□□ 0.44
SfpqQ8VIJ6 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
SfpqQ8VIJ6 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
SfpqQ8VIJ6 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
SfpqQ8VIJ6 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
SfpqQ8VIJ6 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SfpqQ8VIJ6 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
SfpqQ8VIJ6 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SfpqQ8VIJ6 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
SfpqQ8VIJ6 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
SfpqQ8VIJ6 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
SfpqQ8VIJ6 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SfpqQ8VIJ6 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SfpqQ8VIJ6 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
SfpqQ8VIJ6 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
SfpqQ8VIJ6 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SfpqQ8VIJ6 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SfpqQ8VIJ6 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SfpqQ8VIJ6 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC17.76■□□□□ 0.43
SfpqQ8VIJ6 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SfpqQ8VIJ6 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC17.76■□□□□ 0.43
SfpqQ8VIJ6 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SfpqQ8VIJ6 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SfpqQ8VIJ6 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SfpqQ8VIJ6 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SfpqQ8VIJ6 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
SfpqQ8VIJ6 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SfpqQ8VIJ6 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SfpqQ8VIJ6 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SfpqQ8VIJ6 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC17.76■□□□□ 0.43
SfpqQ8VIJ6 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SfpqQ8VIJ6 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SfpqQ8VIJ6 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SfpqQ8VIJ6 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
SfpqQ8VIJ6 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SfpqQ8VIJ6 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
SfpqQ8VIJ6 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SfpqQ8VIJ6 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
SfpqQ8VIJ6 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
SfpqQ8VIJ6 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SfpqQ8VIJ6 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SfpqQ8VIJ6 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SfpqQ8VIJ6 Gm42545-201ENSMUST00000202755 922 ntBASIC17.75■□□□□ 0.43
SfpqQ8VIJ6 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
SfpqQ8VIJ6 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
SfpqQ8VIJ6 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SfpqQ8VIJ6 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SfpqQ8VIJ6 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SfpqQ8VIJ6 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
SfpqQ8VIJ6 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SfpqQ8VIJ6 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SfpqQ8VIJ6 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SfpqQ8VIJ6 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SfpqQ8VIJ6 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SfpqQ8VIJ6 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SfpqQ8VIJ6 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SfpqQ8VIJ6 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
SfpqQ8VIJ6 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SfpqQ8VIJ6 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SfpqQ8VIJ6 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SfpqQ8VIJ6 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
SfpqQ8VIJ6 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SfpqQ8VIJ6 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
SfpqQ8VIJ6 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SfpqQ8VIJ6 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SfpqQ8VIJ6 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
SfpqQ8VIJ6 Gm12382-201ENSMUST00000122005 922 ntBASIC17.74■□□□□ 0.43
SfpqQ8VIJ6 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC17.74■□□□□ 0.43
SfpqQ8VIJ6 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
SfpqQ8VIJ6 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC17.74■□□□□ 0.43
SfpqQ8VIJ6 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms