Protein–RNA interactions for Protein: Q8VHP6

Cdhr1, Cadherin-related family member 1, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr1Q8VHP6 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cdhr1Q8VHP6 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cdhr1Q8VHP6 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Cdhr1Q8VHP6 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cdhr1Q8VHP6 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cdhr1Q8VHP6 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Cdhr1Q8VHP6 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cdhr1Q8VHP6 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cdhr1Q8VHP6 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Cdhr1Q8VHP6 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Cdhr1Q8VHP6 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cdhr1Q8VHP6 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cdhr1Q8VHP6 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Cdhr1Q8VHP6 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Cdhr1Q8VHP6 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cdhr1Q8VHP6 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Cdhr1Q8VHP6 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cdhr1Q8VHP6 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Cdhr1Q8VHP6 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC16.41■□□□□ 0.22
Cdhr1Q8VHP6 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cdhr1Q8VHP6 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cdhr1Q8VHP6 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cdhr1Q8VHP6 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Cdhr1Q8VHP6 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Cdhr1Q8VHP6 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Cdhr1Q8VHP6 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Cdhr1Q8VHP6 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cdhr1Q8VHP6 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cdhr1Q8VHP6 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Cdhr1Q8VHP6 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cdhr1Q8VHP6 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cdhr1Q8VHP6 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cdhr1Q8VHP6 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cdhr1Q8VHP6 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cdhr1Q8VHP6 Gm10461-201ENSMUST00000202073 4786 ntBASIC16.4■□□□□ 0.22
Cdhr1Q8VHP6 Gm13186-201ENSMUST00000118031 316 ntBASIC16.4■□□□□ 0.22
Cdhr1Q8VHP6 Gm11336-201ENSMUST00000118168 334 ntBASIC16.4■□□□□ 0.22
Cdhr1Q8VHP6 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Cdhr1Q8VHP6 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cdhr1Q8VHP6 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Cdhr1Q8VHP6 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cdhr1Q8VHP6 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cdhr1Q8VHP6 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Cdhr1Q8VHP6 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cdhr1Q8VHP6 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Cdhr1Q8VHP6 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Cdhr1Q8VHP6 Dmtn-207ENSMUST00000228001 2437 ntBASIC16.4■□□□□ 0.22
Cdhr1Q8VHP6 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cdhr1Q8VHP6 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Cdhr1Q8VHP6 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Cdhr1Q8VHP6 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cdhr1Q8VHP6 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cdhr1Q8VHP6 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cdhr1Q8VHP6 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Cdhr1Q8VHP6 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Cdhr1Q8VHP6 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Cdhr1Q8VHP6 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Cdhr1Q8VHP6 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cdhr1Q8VHP6 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Cdhr1Q8VHP6 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cdhr1Q8VHP6 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cdhr1Q8VHP6 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC16.39■□□□□ 0.21
Cdhr1Q8VHP6 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC16.39■□□□□ 0.21
Cdhr1Q8VHP6 Gm27357-201ENSMUST00000183754 135 ntBASIC16.39■□□□□ 0.21
Cdhr1Q8VHP6 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Cdhr1Q8VHP6 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cdhr1Q8VHP6 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cdhr1Q8VHP6 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Cdhr1Q8VHP6 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cdhr1Q8VHP6 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cdhr1Q8VHP6 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC16.39■□□□□ 0.21
Cdhr1Q8VHP6 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Cdhr1Q8VHP6 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC16.39■□□□□ 0.21
Cdhr1Q8VHP6 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Cdhr1Q8VHP6 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Cdhr1Q8VHP6 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cdhr1Q8VHP6 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cdhr1Q8VHP6 Phf7-203ENSMUST00000226565 1971 ntBASIC16.38■□□□□ 0.21
Cdhr1Q8VHP6 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Cdhr1Q8VHP6 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cdhr1Q8VHP6 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cdhr1Q8VHP6 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cdhr1Q8VHP6 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cdhr1Q8VHP6 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cdhr1Q8VHP6 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC16.38■□□□□ 0.21
Cdhr1Q8VHP6 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Cdhr1Q8VHP6 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Cdhr1Q8VHP6 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cdhr1Q8VHP6 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Cdhr1Q8VHP6 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cdhr1Q8VHP6 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cdhr1Q8VHP6 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Cdhr1Q8VHP6 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cdhr1Q8VHP6 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cdhr1Q8VHP6 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cdhr1Q8VHP6 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cdhr1Q8VHP6 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Cdhr1Q8VHP6 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cdhr1Q8VHP6 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC16.38■□□□□ 0.21
Cdhr1Q8VHP6 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC16.38■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms