Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ccdc9Q8VC31 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ccdc9Q8VC31 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ccdc9Q8VC31 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ccdc9Q8VC31 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ccdc9Q8VC31 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ccdc9Q8VC31 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Ccdc9Q8VC31 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ccdc9Q8VC31 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ccdc9Q8VC31 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ccdc9Q8VC31 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ccdc9Q8VC31 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Ccdc9Q8VC31 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Ccdc9Q8VC31 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Ccdc9Q8VC31 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC20.3■□□□□ 0.84
Ccdc9Q8VC31 AC137127.1-201ENSMUST00000213466 1078 ntBASIC20.3■□□□□ 0.84
Ccdc9Q8VC31 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Ccdc9Q8VC31 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ccdc9Q8VC31 AC165080.2-201ENSMUST00000217491 1530 ntBASIC20.3■□□□□ 0.84
Ccdc9Q8VC31 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ccdc9Q8VC31 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ccdc9Q8VC31 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ccdc9Q8VC31 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ccdc9Q8VC31 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ccdc9Q8VC31 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC20.3■□□□□ 0.84
Ccdc9Q8VC31 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ccdc9Q8VC31 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ccdc9Q8VC31 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Ccdc9Q8VC31 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Ccdc9Q8VC31 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Ccdc9Q8VC31 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ccdc9Q8VC31 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC20.29■□□□□ 0.84
Ccdc9Q8VC31 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ccdc9Q8VC31 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ccdc9Q8VC31 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Ccdc9Q8VC31 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
Ccdc9Q8VC31 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC20.29■□□□□ 0.84
Ccdc9Q8VC31 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ccdc9Q8VC31 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ccdc9Q8VC31 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ccdc9Q8VC31 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ccdc9Q8VC31 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ccdc9Q8VC31 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ccdc9Q8VC31 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ccdc9Q8VC31 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Ccdc9Q8VC31 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ccdc9Q8VC31 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ccdc9Q8VC31 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ccdc9Q8VC31 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ccdc9Q8VC31 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ccdc9Q8VC31 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Ccdc9Q8VC31 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ccdc9Q8VC31 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Ccdc9Q8VC31 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Ccdc9Q8VC31 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ccdc9Q8VC31 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Ccdc9Q8VC31 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Ccdc9Q8VC31 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC20.28■□□□□ 0.84
Ccdc9Q8VC31 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ccdc9Q8VC31 Gm43352-201ENSMUST00000196419 3065 ntBASIC20.28■□□□□ 0.84
Ccdc9Q8VC31 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ccdc9Q8VC31 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ccdc9Q8VC31 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ccdc9Q8VC31 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ccdc9Q8VC31 Gm10710-201ENSMUST00000047876 3971 ntBASIC20.27■□□□□ 0.84
Ccdc9Q8VC31 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Ccdc9Q8VC31 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ccdc9Q8VC31 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ccdc9Q8VC31 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ccdc9Q8VC31 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ccdc9Q8VC31 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC20.27■□□□□ 0.84
Ccdc9Q8VC31 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ccdc9Q8VC31 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ccdc9Q8VC31 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ccdc9Q8VC31 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC20.27■□□□□ 0.84
Ccdc9Q8VC31 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Ccdc9Q8VC31 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Ccdc9Q8VC31 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ccdc9Q8VC31 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Ccdc9Q8VC31 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Ccdc9Q8VC31 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC20.27■□□□□ 0.83
Ccdc9Q8VC31 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Ccdc9Q8VC31 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
Ccdc9Q8VC31 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ccdc9Q8VC31 Gm36858-201ENSMUST00000194501 2391 ntBASIC20.26■□□□□ 0.83
Ccdc9Q8VC31 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Ccdc9Q8VC31 Gm11421-201ENSMUST00000122124 294 ntBASIC20.26■□□□□ 0.83
Ccdc9Q8VC31 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
Ccdc9Q8VC31 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC20.26■□□□□ 0.83
Ccdc9Q8VC31 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC20.26■□□□□ 0.83
Ccdc9Q8VC31 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ccdc9Q8VC31 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ccdc9Q8VC31 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ccdc9Q8VC31 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC20.25■□□□□ 0.83
Ccdc9Q8VC31 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ccdc9Q8VC31 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ccdc9Q8VC31 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC20.25■□□□□ 0.83
Ccdc9Q8VC31 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Ccdc9Q8VC31 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Ccdc9Q8VC31 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms