Protein–RNA interactions for Protein: Q8R429

Atp2a1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp2a1Q8R429 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Atp2a1Q8R429 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Atp2a1Q8R429 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
Atp2a1Q8R429 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
Atp2a1Q8R429 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Atp2a1Q8R429 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Atp2a1Q8R429 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Atp2a1Q8R429 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Atp2a1Q8R429 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
Atp2a1Q8R429 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Atp2a1Q8R429 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Atp2a1Q8R429 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Atp2a1Q8R429 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Atp2a1Q8R429 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC18.77■□□□□ 0.6
Atp2a1Q8R429 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Atp2a1Q8R429 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Atp2a1Q8R429 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Atp2a1Q8R429 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Atp2a1Q8R429 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Atp2a1Q8R429 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Atp2a1Q8R429 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Atp2a1Q8R429 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC18.77■□□□□ 0.59
Atp2a1Q8R429 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
Atp2a1Q8R429 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Atp2a1Q8R429 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Atp2a1Q8R429 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Atp2a1Q8R429 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC18.76■□□□□ 0.59
Atp2a1Q8R429 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Atp2a1Q8R429 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Atp2a1Q8R429 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Atp2a1Q8R429 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Atp2a1Q8R429 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Atp2a1Q8R429 Mir3081-201ENSMUST00000175305 84 ntBASIC18.76■□□□□ 0.59
Atp2a1Q8R429 Ighv6-1-201ENSMUST00000193612 343 ntBASIC18.76■□□□□ 0.59
Atp2a1Q8R429 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Atp2a1Q8R429 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC18.76■□□□□ 0.59
Atp2a1Q8R429 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Atp2a1Q8R429 Gm6598-201ENSMUST00000202719 2615 ntBASIC18.76■□□□□ 0.59
Atp2a1Q8R429 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Atp2a1Q8R429 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Atp2a1Q8R429 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Atp2a1Q8R429 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Atp2a1Q8R429 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Atp2a1Q8R429 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Atp2a1Q8R429 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Atp2a1Q8R429 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Atp2a1Q8R429 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Atp2a1Q8R429 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC18.75■□□□□ 0.59
Atp2a1Q8R429 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Atp2a1Q8R429 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Atp2a1Q8R429 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Atp2a1Q8R429 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Atp2a1Q8R429 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Atp2a1Q8R429 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Atp2a1Q8R429 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Atp2a1Q8R429 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Atp2a1Q8R429 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Atp2a1Q8R429 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Atp2a1Q8R429 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Atp2a1Q8R429 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Atp2a1Q8R429 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Atp2a1Q8R429 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Atp2a1Q8R429 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Atp2a1Q8R429 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Atp2a1Q8R429 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Atp2a1Q8R429 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Atp2a1Q8R429 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Atp2a1Q8R429 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Atp2a1Q8R429 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC18.74■□□□□ 0.59
Atp2a1Q8R429 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Atp2a1Q8R429 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Atp2a1Q8R429 Gm11336-201ENSMUST00000118168 334 ntBASIC18.74■□□□□ 0.59
Atp2a1Q8R429 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Atp2a1Q8R429 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Atp2a1Q8R429 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Atp2a1Q8R429 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Atp2a1Q8R429 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Atp2a1Q8R429 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Atp2a1Q8R429 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Atp2a1Q8R429 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Atp2a1Q8R429 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Atp2a1Q8R429 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Atp2a1Q8R429 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Atp2a1Q8R429 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Atp2a1Q8R429 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Atp2a1Q8R429 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Atp2a1Q8R429 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Atp2a1Q8R429 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Atp2a1Q8R429 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Atp2a1Q8R429 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Atp2a1Q8R429 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Atp2a1Q8R429 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Atp2a1Q8R429 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Atp2a1Q8R429 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC18.73■□□□□ 0.59
Atp2a1Q8R429 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Atp2a1Q8R429 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Atp2a1Q8R429 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Atp2a1Q8R429 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Atp2a1Q8R429 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Atp2a1Q8R429 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms