Protein–RNA interactions for Protein: Q8R3Z5

Cacnb1, Voltage-dependent L-type calcium channel subunit beta-1, mousemouse

Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacnb1Q8R3Z5 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Cacnb1Q8R3Z5 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC18.96■□□□□ 0.63
Cacnb1Q8R3Z5 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cacnb1Q8R3Z5 Anxa10-202ENSMUST00000034054 1222 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Cacnb1Q8R3Z5 Xlr-201ENSMUST00000067763 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cacnb1Q8R3Z5 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cacnb1Q8R3Z5 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cacnb1Q8R3Z5 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC18.96■□□□□ 0.63
Cacnb1Q8R3Z5 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Cacnb1Q8R3Z5 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cacnb1Q8R3Z5 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Cacnb1Q8R3Z5 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cacnb1Q8R3Z5 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Cacnb1Q8R3Z5 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cacnb1Q8R3Z5 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Cacnb1Q8R3Z5 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Cacnb1Q8R3Z5 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Cacnb1Q8R3Z5 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cacnb1Q8R3Z5 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cacnb1Q8R3Z5 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cacnb1Q8R3Z5 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cacnb1Q8R3Z5 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cacnb1Q8R3Z5 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC18.95■□□□□ 0.62
Cacnb1Q8R3Z5 Gm13033-201ENSMUST00000117591 1057 ntBASIC18.95■□□□□ 0.62
Cacnb1Q8R3Z5 Gm15063-201ENSMUST00000152648 895 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Cacnb1Q8R3Z5 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cacnb1Q8R3Z5 Vmn1r23-201ENSMUST00000175817 997 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Cacnb1Q8R3Z5 Gm43731-201ENSMUST00000196150 666 ntTSL 3 BASIC18.95■□□□□ 0.62
Cacnb1Q8R3Z5 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
Cacnb1Q8R3Z5 Gm7791-201ENSMUST00000219066 539 ntBASIC18.95■□□□□ 0.62
Cacnb1Q8R3Z5 Trdn-207ENSMUST00000219931 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cacnb1Q8R3Z5 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Cacnb1Q8R3Z5 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Cacnb1Q8R3Z5 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Cacnb1Q8R3Z5 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC18.95■□□□□ 0.62
Cacnb1Q8R3Z5 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cacnb1Q8R3Z5 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cacnb1Q8R3Z5 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Cacnb1Q8R3Z5 Gm15635-204ENSMUST00000208024 2539 ntBASIC18.95■□□□□ 0.62
Cacnb1Q8R3Z5 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cacnb1Q8R3Z5 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC18.95■□□□□ 0.62
Cacnb1Q8R3Z5 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cacnb1Q8R3Z5 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cacnb1Q8R3Z5 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Cacnb1Q8R3Z5 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cacnb1Q8R3Z5 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cacnb1Q8R3Z5 Gm15565-201ENSMUST00000118890 427 ntBASIC18.94■□□□□ 0.62
Cacnb1Q8R3Z5 Gm14905-201ENSMUST00000122351 639 ntBASIC18.94■□□□□ 0.62
Cacnb1Q8R3Z5 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Cacnb1Q8R3Z5 Gm3099-202ENSMUST00000178274 618 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Cacnb1Q8R3Z5 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cacnb1Q8R3Z5 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cacnb1Q8R3Z5 AC132446.1-201ENSMUST00000222655 226 ntBASIC18.94■□□□□ 0.62
Cacnb1Q8R3Z5 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cacnb1Q8R3Z5 Ms4a4b-201ENSMUST00000035258 1244 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cacnb1Q8R3Z5 Tnfsf9-201ENSMUST00000039490 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cacnb1Q8R3Z5 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Cacnb1Q8R3Z5 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cacnb1Q8R3Z5 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cacnb1Q8R3Z5 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cacnb1Q8R3Z5 Gm44286-201ENSMUST00000204098 1487 ntBASIC18.94■□□□□ 0.62
Cacnb1Q8R3Z5 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cacnb1Q8R3Z5 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cacnb1Q8R3Z5 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cacnb1Q8R3Z5 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cacnb1Q8R3Z5 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
Cacnb1Q8R3Z5 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cacnb1Q8R3Z5 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cacnb1Q8R3Z5 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Cacnb1Q8R3Z5 Gm26831-201ENSMUST00000181458 1380 ntBASIC18.93■□□□□ 0.62
Cacnb1Q8R3Z5 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC18.93■□□□□ 0.62
Cacnb1Q8R3Z5 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cacnb1Q8R3Z5 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cacnb1Q8R3Z5 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cacnb1Q8R3Z5 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cacnb1Q8R3Z5 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Cacnb1Q8R3Z5 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cacnb1Q8R3Z5 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cacnb1Q8R3Z5 Gm25295-201ENSMUST00000122794 306 ntBASIC18.93■□□□□ 0.62
Cacnb1Q8R3Z5 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Cacnb1Q8R3Z5 Gm11728-201ENSMUST00000150628 660 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Cacnb1Q8R3Z5 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC18.93■□□□□ 0.62
Cacnb1Q8R3Z5 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cacnb1Q8R3Z5 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
Cacnb1Q8R3Z5 Gm37025-201ENSMUST00000195159 829 ntBASIC18.93■□□□□ 0.62
Cacnb1Q8R3Z5 Gm43489-201ENSMUST00000196810 993 ntBASIC18.93■□□□□ 0.62
Cacnb1Q8R3Z5 Gm30025-201ENSMUST00000218555 728 ntBASIC18.93■□□□□ 0.62
Cacnb1Q8R3Z5 AC153932.1-201ENSMUST00000218558 787 ntBASIC18.93■□□□□ 0.62
Cacnb1Q8R3Z5 AC159205.7-201ENSMUST00000225988 692 ntBASIC18.93■□□□□ 0.62
Cacnb1Q8R3Z5 Vmn1r11-201ENSMUST00000071304 900 ntAPPRIS P2 BASIC18.93■□□□□ 0.62
Cacnb1Q8R3Z5 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cacnb1Q8R3Z5 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cacnb1Q8R3Z5 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cacnb1Q8R3Z5 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Cacnb1Q8R3Z5 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Cacnb1Q8R3Z5 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cacnb1Q8R3Z5 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cacnb1Q8R3Z5 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cacnb1Q8R3Z5 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC18.93■□□□□ 0.62
Cacnb1Q8R3Z5 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms