Protein–RNA interactions for Protein: Q8R323

Rfc3, Replication factor C subunit 3, mousemouse

Known RBP Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc3Q8R323 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rfc3Q8R323 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC15.53■□□□□ 0.08
Rfc3Q8R323 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Rfc3Q8R323 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rfc3Q8R323 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rfc3Q8R323 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rfc3Q8R323 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC15.53■□□□□ 0.08
Rfc3Q8R323 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Rfc3Q8R323 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rfc3Q8R323 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rfc3Q8R323 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rfc3Q8R323 Haglr-201ENSMUST00000100000 2085 ntBASIC15.53■□□□□ 0.08
Rfc3Q8R323 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rfc3Q8R323 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rfc3Q8R323 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Rfc3Q8R323 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rfc3Q8R323 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rfc3Q8R323 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rfc3Q8R323 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rfc3Q8R323 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rfc3Q8R323 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rfc3Q8R323 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rfc3Q8R323 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC15.52■□□□□ 0.08
Rfc3Q8R323 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Rfc3Q8R323 AC120002.2-201ENSMUST00000220205 773 ntBASIC15.52■□□□□ 0.08
Rfc3Q8R323 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rfc3Q8R323 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rfc3Q8R323 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Rfc3Q8R323 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Rfc3Q8R323 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Rfc3Q8R323 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Rfc3Q8R323 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Rfc3Q8R323 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Rfc3Q8R323 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Rfc3Q8R323 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Rfc3Q8R323 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Rfc3Q8R323 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Rfc3Q8R323 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Rfc3Q8R323 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Rfc3Q8R323 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rfc3Q8R323 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rfc3Q8R323 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Rfc3Q8R323 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rfc3Q8R323 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rfc3Q8R323 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rfc3Q8R323 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Rfc3Q8R323 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Rfc3Q8R323 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC15.51■□□□□ 0.07
Rfc3Q8R323 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Rfc3Q8R323 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC15.51■□□□□ 0.07
Rfc3Q8R323 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rfc3Q8R323 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Rfc3Q8R323 Gm6345-202ENSMUST00000180900 204 ntBASIC15.51■□□□□ 0.07
Rfc3Q8R323 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Rfc3Q8R323 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rfc3Q8R323 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC15.51■□□□□ 0.07
Rfc3Q8R323 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rfc3Q8R323 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Rfc3Q8R323 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Rfc3Q8R323 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rfc3Q8R323 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Rfc3Q8R323 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rfc3Q8R323 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rfc3Q8R323 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rfc3Q8R323 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rfc3Q8R323 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rfc3Q8R323 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rfc3Q8R323 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rfc3Q8R323 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rfc3Q8R323 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Rfc3Q8R323 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rfc3Q8R323 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rfc3Q8R323 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rfc3Q8R323 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rfc3Q8R323 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Rfc3Q8R323 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rfc3Q8R323 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Rfc3Q8R323 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Rfc3Q8R323 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rfc3Q8R323 Spsb2-203ENSMUST00000112473 1322 ntBASIC15.5■□□□□ 0.07
Rfc3Q8R323 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC15.5■□□□□ 0.07
Rfc3Q8R323 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rfc3Q8R323 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rfc3Q8R323 Gm37812-201ENSMUST00000195216 2475 ntBASIC15.5■□□□□ 0.07
Rfc3Q8R323 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Rfc3Q8R323 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rfc3Q8R323 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Rfc3Q8R323 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Rfc3Q8R323 Gm13474-201ENSMUST00000122466 815 ntBASIC15.5■□□□□ 0.07
Rfc3Q8R323 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Rfc3Q8R323 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC15.5■□□□□ 0.07
Rfc3Q8R323 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Rfc3Q8R323 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Rfc3Q8R323 Il3ra-202ENSMUST00000223589 738 ntBASIC15.5■□□□□ 0.07
Rfc3Q8R323 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Rfc3Q8R323 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC15.5■□□□□ 0.07
Rfc3Q8R323 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rfc3Q8R323 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rfc3Q8R323 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rfc3Q8R323 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC15.5■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms