Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Nudcd3Q8R1N4 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nudcd3Q8R1N4 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nudcd3Q8R1N4 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Nudcd3Q8R1N4 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nudcd3Q8R1N4 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nudcd3Q8R1N4 Gm10849-201ENSMUST00000100397 618 ntBASIC16.85■□□□□ 0.29
Nudcd3Q8R1N4 Gm15375-201ENSMUST00000119510 849 ntBASIC16.85■□□□□ 0.29
Nudcd3Q8R1N4 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC16.85■□□□□ 0.29
Nudcd3Q8R1N4 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Nudcd3Q8R1N4 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC16.85■□□□□ 0.29
Nudcd3Q8R1N4 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC16.85■□□□□ 0.29
Nudcd3Q8R1N4 Gm26571-201ENSMUST00000181399 666 ntBASIC16.85■□□□□ 0.29
Nudcd3Q8R1N4 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nudcd3Q8R1N4 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nudcd3Q8R1N4 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nudcd3Q8R1N4 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Nudcd3Q8R1N4 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Nudcd3Q8R1N4 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nudcd3Q8R1N4 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nudcd3Q8R1N4 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nudcd3Q8R1N4 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Nudcd3Q8R1N4 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nudcd3Q8R1N4 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Nudcd3Q8R1N4 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nudcd3Q8R1N4 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Nudcd3Q8R1N4 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nudcd3Q8R1N4 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Nudcd3Q8R1N4 Zkscan3-208ENSMUST00000224820 5398 ntBASIC16.84■□□□□ 0.29
Nudcd3Q8R1N4 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Nudcd3Q8R1N4 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC16.84■□□□□ 0.29
Nudcd3Q8R1N4 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nudcd3Q8R1N4 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Nudcd3Q8R1N4 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Nudcd3Q8R1N4 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Nudcd3Q8R1N4 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nudcd3Q8R1N4 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nudcd3Q8R1N4 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nudcd3Q8R1N4 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nudcd3Q8R1N4 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nudcd3Q8R1N4 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nudcd3Q8R1N4 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
Nudcd3Q8R1N4 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nudcd3Q8R1N4 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nudcd3Q8R1N4 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nudcd3Q8R1N4 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
Nudcd3Q8R1N4 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Nudcd3Q8R1N4 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nudcd3Q8R1N4 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nudcd3Q8R1N4 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Nudcd3Q8R1N4 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Nudcd3Q8R1N4 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC16.83■□□□□ 0.29
Nudcd3Q8R1N4 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Nudcd3Q8R1N4 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Nudcd3Q8R1N4 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC16.83■□□□□ 0.29
Nudcd3Q8R1N4 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Nudcd3Q8R1N4 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC16.83■□□□□ 0.29
Nudcd3Q8R1N4 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Nudcd3Q8R1N4 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nudcd3Q8R1N4 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Nudcd3Q8R1N4 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC16.83■□□□□ 0.28
Nudcd3Q8R1N4 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nudcd3Q8R1N4 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nudcd3Q8R1N4 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Nudcd3Q8R1N4 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nudcd3Q8R1N4 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Nudcd3Q8R1N4 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Nudcd3Q8R1N4 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nudcd3Q8R1N4 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nudcd3Q8R1N4 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Nudcd3Q8R1N4 AC069562.2-201ENSMUST00000224644 2146 ntBASIC16.82■□□□□ 0.28
Nudcd3Q8R1N4 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nudcd3Q8R1N4 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Nudcd3Q8R1N4 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nudcd3Q8R1N4 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nudcd3Q8R1N4 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
Nudcd3Q8R1N4 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nudcd3Q8R1N4 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nudcd3Q8R1N4 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nudcd3Q8R1N4 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Nudcd3Q8R1N4 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
Nudcd3Q8R1N4 Gm45560-201ENSMUST00000211492 1472 ntBASIC16.82■□□□□ 0.28
Nudcd3Q8R1N4 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nudcd3Q8R1N4 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nudcd3Q8R1N4 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC16.82■□□□□ 0.28
Nudcd3Q8R1N4 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nudcd3Q8R1N4 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nudcd3Q8R1N4 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nudcd3Q8R1N4 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nudcd3Q8R1N4 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nudcd3Q8R1N4 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nudcd3Q8R1N4 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nudcd3Q8R1N4 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
Nudcd3Q8R1N4 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nudcd3Q8R1N4 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
Nudcd3Q8R1N4 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Nudcd3Q8R1N4 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Nudcd3Q8R1N4 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Nudcd3Q8R1N4 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Nudcd3Q8R1N4 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 165.3 ms