Protein–RNA interactions for Protein: Q8R1J1

Tm6sf2, Transmembrane 6 superfamily member 2, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tm6sf2Q8R1J1 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Tm6sf2Q8R1J1 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Tm6sf2Q8R1J1 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Tm6sf2Q8R1J1 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Tm6sf2Q8R1J1 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Tm6sf2Q8R1J1 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Tm6sf2Q8R1J1 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Tm6sf2Q8R1J1 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Tm6sf2Q8R1J1 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Tm6sf2Q8R1J1 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Tm6sf2Q8R1J1 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Tm6sf2Q8R1J1 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Tm6sf2Q8R1J1 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Tm6sf2Q8R1J1 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Tm6sf2Q8R1J1 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Tm6sf2Q8R1J1 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Tm6sf2Q8R1J1 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Tm6sf2Q8R1J1 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Tm6sf2Q8R1J1 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Tm6sf2Q8R1J1 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC15.8■□□□□ 0.12
Tm6sf2Q8R1J1 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC15.8■□□□□ 0.12
Tm6sf2Q8R1J1 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Tm6sf2Q8R1J1 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Tm6sf2Q8R1J1 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Tm6sf2Q8R1J1 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Tm6sf2Q8R1J1 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC15.8■□□□□ 0.12
Tm6sf2Q8R1J1 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Tm6sf2Q8R1J1 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Tm6sf2Q8R1J1 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Tm6sf2Q8R1J1 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Tm6sf2Q8R1J1 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Tm6sf2Q8R1J1 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Tm6sf2Q8R1J1 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
Tm6sf2Q8R1J1 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Tm6sf2Q8R1J1 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Tm6sf2Q8R1J1 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Tm6sf2Q8R1J1 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Tm6sf2Q8R1J1 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Tm6sf2Q8R1J1 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Tm6sf2Q8R1J1 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Tm6sf2Q8R1J1 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Tm6sf2Q8R1J1 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Tm6sf2Q8R1J1 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Tm6sf2Q8R1J1 Gm11355-201ENSMUST00000121120 306 ntBASIC15.79■□□□□ 0.12
Tm6sf2Q8R1J1 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC15.79■□□□□ 0.12
Tm6sf2Q8R1J1 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Tm6sf2Q8R1J1 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Tm6sf2Q8R1J1 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Tm6sf2Q8R1J1 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Tm6sf2Q8R1J1 Wnt10b-204ENSMUST00000226655 1807 ntBASIC15.79■□□□□ 0.12
Tm6sf2Q8R1J1 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Tm6sf2Q8R1J1 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC15.79■□□□□ 0.12
Tm6sf2Q8R1J1 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Tm6sf2Q8R1J1 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Tm6sf2Q8R1J1 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Tm6sf2Q8R1J1 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Tm6sf2Q8R1J1 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Tm6sf2Q8R1J1 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Tm6sf2Q8R1J1 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Tm6sf2Q8R1J1 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Tm6sf2Q8R1J1 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Tm6sf2Q8R1J1 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC15.78■□□□□ 0.12
Tm6sf2Q8R1J1 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC15.78■□□□□ 0.12
Tm6sf2Q8R1J1 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Tm6sf2Q8R1J1 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Tm6sf2Q8R1J1 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Tm6sf2Q8R1J1 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Tm6sf2Q8R1J1 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC15.78■□□□□ 0.12
Tm6sf2Q8R1J1 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Tm6sf2Q8R1J1 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Tm6sf2Q8R1J1 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Tm6sf2Q8R1J1 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC15.77■□□□□ 0.12
Tm6sf2Q8R1J1 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC15.77■□□□□ 0.12
Tm6sf2Q8R1J1 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Tm6sf2Q8R1J1 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC15.77■□□□□ 0.12
Tm6sf2Q8R1J1 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC15.77■□□□□ 0.12
Tm6sf2Q8R1J1 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Tm6sf2Q8R1J1 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Tm6sf2Q8R1J1 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Tm6sf2Q8R1J1 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC15.77■□□□□ 0.12
Tm6sf2Q8R1J1 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC15.77■□□□□ 0.12
Tm6sf2Q8R1J1 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Tm6sf2Q8R1J1 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC15.77■□□□□ 0.12
Tm6sf2Q8R1J1 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC15.77■□□□□ 0.12
Tm6sf2Q8R1J1 AC130671.1-201ENSMUST00000227384 1237 ntBASIC15.77■□□□□ 0.12
Tm6sf2Q8R1J1 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Tm6sf2Q8R1J1 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Tm6sf2Q8R1J1 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Tm6sf2Q8R1J1 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Tm6sf2Q8R1J1 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Tm6sf2Q8R1J1 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC15.77■□□□□ 0.11
Tm6sf2Q8R1J1 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Tm6sf2Q8R1J1 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Tm6sf2Q8R1J1 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Tm6sf2Q8R1J1 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
Tm6sf2Q8R1J1 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
Tm6sf2Q8R1J1 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC15.77■□□□□ 0.11
Tm6sf2Q8R1J1 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Tm6sf2Q8R1J1 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Tm6sf2Q8R1J1 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms