Protein–RNA interactions for Protein: Q8R1C3

Vopp1, Vesicular, overexpressed in cancer, prosurvival protein 1, mousemouse

Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vopp1Q8R1C3 Gm44313-201ENSMUST00000198018 138 ntBASIC17.82■□□□□ 0.44
Vopp1Q8R1C3 Gm44486-201ENSMUST00000198508 138 ntBASIC17.82■□□□□ 0.44
Vopp1Q8R1C3 Gm44454-201ENSMUST00000198541 138 ntBASIC17.82■□□□□ 0.44
Vopp1Q8R1C3 Gm44314-201ENSMUST00000199263 138 ntBASIC17.82■□□□□ 0.44
Vopp1Q8R1C3 Gm44394-201ENSMUST00000199558 138 ntBASIC17.82■□□□□ 0.44
Vopp1Q8R1C3 Gm44484-201ENSMUST00000199873 138 ntBASIC17.82■□□□□ 0.44
Vopp1Q8R1C3 Gm44466-201ENSMUST00000200264 138 ntBASIC17.82■□□□□ 0.44
Vopp1Q8R1C3 Gm44359-201ENSMUST00000200671 138 ntBASIC17.82■□□□□ 0.44
Vopp1Q8R1C3 AC108846.1-201ENSMUST00000214531 513 ntBASIC17.82■□□□□ 0.44
Vopp1Q8R1C3 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Vopp1Q8R1C3 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Vopp1Q8R1C3 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Vopp1Q8R1C3 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Vopp1Q8R1C3 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Vopp1Q8R1C3 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Vopp1Q8R1C3 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Vopp1Q8R1C3 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Vopp1Q8R1C3 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Vopp1Q8R1C3 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Vopp1Q8R1C3 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Vopp1Q8R1C3 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Vopp1Q8R1C3 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC17.81■□□□□ 0.44
Vopp1Q8R1C3 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Vopp1Q8R1C3 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Vopp1Q8R1C3 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Vopp1Q8R1C3 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC17.81■□□□□ 0.44
Vopp1Q8R1C3 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC17.81■□□□□ 0.44
Vopp1Q8R1C3 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC17.81■□□□□ 0.44
Vopp1Q8R1C3 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Vopp1Q8R1C3 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Vopp1Q8R1C3 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Vopp1Q8R1C3 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
Vopp1Q8R1C3 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vopp1Q8R1C3 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Vopp1Q8R1C3 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Vopp1Q8R1C3 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Vopp1Q8R1C3 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vopp1Q8R1C3 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC17.8■□□□□ 0.44
Vopp1Q8R1C3 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vopp1Q8R1C3 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vopp1Q8R1C3 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC17.8■□□□□ 0.44
Vopp1Q8R1C3 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC17.8■□□□□ 0.44
Vopp1Q8R1C3 Rprl3-201ENSMUST00000157400 290 ntBASIC17.8■□□□□ 0.44
Vopp1Q8R1C3 Gm6296-201ENSMUST00000222599 943 ntBASIC17.8■□□□□ 0.44
Vopp1Q8R1C3 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vopp1Q8R1C3 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vopp1Q8R1C3 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vopp1Q8R1C3 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vopp1Q8R1C3 Gm11841-201ENSMUST00000117060 1963 ntBASIC17.8■□□□□ 0.44
Vopp1Q8R1C3 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vopp1Q8R1C3 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vopp1Q8R1C3 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vopp1Q8R1C3 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vopp1Q8R1C3 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vopp1Q8R1C3 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vopp1Q8R1C3 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Vopp1Q8R1C3 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Vopp1Q8R1C3 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Vopp1Q8R1C3 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC17.79■□□□□ 0.44
Vopp1Q8R1C3 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Vopp1Q8R1C3 AC159301.1-201ENSMUST00000225130 1182 ntBASIC17.79■□□□□ 0.44
Vopp1Q8R1C3 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Vopp1Q8R1C3 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Vopp1Q8R1C3 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Vopp1Q8R1C3 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Vopp1Q8R1C3 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Vopp1Q8R1C3 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Vopp1Q8R1C3 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
Vopp1Q8R1C3 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.78■□□□□ 0.44
Vopp1Q8R1C3 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Vopp1Q8R1C3 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Vopp1Q8R1C3 Gm12644-201ENSMUST00000119935 606 ntBASIC17.78■□□□□ 0.44
Vopp1Q8R1C3 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC17.78■□□□□ 0.44
Vopp1Q8R1C3 Mir8098-201ENSMUST00000184011 137 ntBASIC17.78■□□□□ 0.44
Vopp1Q8R1C3 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC17.78■□□□□ 0.44
Vopp1Q8R1C3 Gm28659-201ENSMUST00000188013 759 ntBASIC17.78■□□□□ 0.44
Vopp1Q8R1C3 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Vopp1Q8R1C3 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Vopp1Q8R1C3 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Vopp1Q8R1C3 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Vopp1Q8R1C3 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Vopp1Q8R1C3 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Vopp1Q8R1C3 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Vopp1Q8R1C3 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Vopp1Q8R1C3 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC17.77■□□□□ 0.44
Vopp1Q8R1C3 Gm15165-201ENSMUST00000118140 502 ntBASIC17.77■□□□□ 0.44
Vopp1Q8R1C3 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
Vopp1Q8R1C3 AW822252-206ENSMUST00000208904 237 ntBASIC17.77■□□□□ 0.44
Vopp1Q8R1C3 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC17.77■□□□□ 0.44
Vopp1Q8R1C3 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
Vopp1Q8R1C3 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Vopp1Q8R1C3 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Vopp1Q8R1C3 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Vopp1Q8R1C3 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Vopp1Q8R1C3 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Vopp1Q8R1C3 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
Vopp1Q8R1C3 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Vopp1Q8R1C3 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Vopp1Q8R1C3 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Vopp1Q8R1C3 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms