Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Mir1668-201ENSMUST00000184114 107 ntBASIC20.57■□□□□ 0.88
Sf3a1Q8K4Z5 Gm43294-201ENSMUST00000202850 2490 ntBASIC20.57■□□□□ 0.88
Sf3a1Q8K4Z5 Gm18032-201ENSMUST00000222541 538 ntBASIC20.57■□□□□ 0.88
Sf3a1Q8K4Z5 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Sf3a1Q8K4Z5 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Sf3a1Q8K4Z5 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Sf3a1Q8K4Z5 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Sf3a1Q8K4Z5 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Sf3a1Q8K4Z5 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Sf3a1Q8K4Z5 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
Sf3a1Q8K4Z5 Actl10-202ENSMUST00000226583 1501 ntBASIC20.57■□□□□ 0.88
Sf3a1Q8K4Z5 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Sf3a1Q8K4Z5 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Sf3a1Q8K4Z5 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Sf3a1Q8K4Z5 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Sf3a1Q8K4Z5 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Sf3a1Q8K4Z5 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Sf3a1Q8K4Z5 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sf3a1Q8K4Z5 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sf3a1Q8K4Z5 Gm3272-201ENSMUST00000181181 1229 ntBASIC20.56■□□□□ 0.88
Sf3a1Q8K4Z5 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC20.56■□□□□ 0.88
Sf3a1Q8K4Z5 AC134329.2-201ENSMUST00000217897 428 ntBASIC20.56■□□□□ 0.88
Sf3a1Q8K4Z5 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sf3a1Q8K4Z5 Gm10566-201ENSMUST00000086739 996 ntBASIC20.56■□□□□ 0.88
Sf3a1Q8K4Z5 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC20.56■□□□□ 0.88
Sf3a1Q8K4Z5 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sf3a1Q8K4Z5 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Sf3a1Q8K4Z5 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sf3a1Q8K4Z5 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sf3a1Q8K4Z5 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sf3a1Q8K4Z5 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sf3a1Q8K4Z5 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Sf3a1Q8K4Z5 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC20.55■□□□□ 0.88
Sf3a1Q8K4Z5 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Sf3a1Q8K4Z5 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Sf3a1Q8K4Z5 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Sf3a1Q8K4Z5 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC20.55■□□□□ 0.88
Sf3a1Q8K4Z5 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Sf3a1Q8K4Z5 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Sf3a1Q8K4Z5 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Sf3a1Q8K4Z5 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Sf3a1Q8K4Z5 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Sf3a1Q8K4Z5 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Sf3a1Q8K4Z5 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Sf3a1Q8K4Z5 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Sf3a1Q8K4Z5 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Sf3a1Q8K4Z5 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Sf3a1Q8K4Z5 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Sf3a1Q8K4Z5 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Sf3a1Q8K4Z5 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sf3a1Q8K4Z5 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sf3a1Q8K4Z5 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Sf3a1Q8K4Z5 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sf3a1Q8K4Z5 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC20.54■□□□□ 0.88
Sf3a1Q8K4Z5 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sf3a1Q8K4Z5 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sf3a1Q8K4Z5 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Sf3a1Q8K4Z5 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
Sf3a1Q8K4Z5 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sf3a1Q8K4Z5 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sf3a1Q8K4Z5 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC20.54■□□□□ 0.88
Sf3a1Q8K4Z5 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC20.54■□□□□ 0.88
Sf3a1Q8K4Z5 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC20.54■□□□□ 0.88
Sf3a1Q8K4Z5 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Sf3a1Q8K4Z5 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Sf3a1Q8K4Z5 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC20.54■□□□□ 0.88
Sf3a1Q8K4Z5 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC20.54■□□□□ 0.88
Sf3a1Q8K4Z5 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sf3a1Q8K4Z5 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sf3a1Q8K4Z5 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sf3a1Q8K4Z5 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sf3a1Q8K4Z5 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sf3a1Q8K4Z5 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sf3a1Q8K4Z5 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Sf3a1Q8K4Z5 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sf3a1Q8K4Z5 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sf3a1Q8K4Z5 Gm22697-201ENSMUST00000175194 63 ntBASIC20.53■□□□□ 0.88
Sf3a1Q8K4Z5 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Sf3a1Q8K4Z5 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC20.53■□□□□ 0.88
Sf3a1Q8K4Z5 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sf3a1Q8K4Z5 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sf3a1Q8K4Z5 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sf3a1Q8K4Z5 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Sf3a1Q8K4Z5 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Sf3a1Q8K4Z5 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sf3a1Q8K4Z5 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC20.53■□□□□ 0.88
Sf3a1Q8K4Z5 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Sf3a1Q8K4Z5 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC20.53■□□□□ 0.88
Sf3a1Q8K4Z5 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sf3a1Q8K4Z5 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sf3a1Q8K4Z5 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC20.53■□□□□ 0.88
Sf3a1Q8K4Z5 Wnt10b-204ENSMUST00000226655 1807 ntBASIC20.53■□□□□ 0.88
Sf3a1Q8K4Z5 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sf3a1Q8K4Z5 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Sf3a1Q8K4Z5 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sf3a1Q8K4Z5 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Sf3a1Q8K4Z5 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Sf3a1Q8K4Z5 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Sf3a1Q8K4Z5 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Sf3a1Q8K4Z5 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms