Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC22.01■■□□□ 1.11
Ddx54Q8K4L0 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Ddx54Q8K4L0 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Ddx54Q8K4L0 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC22.01■■□□□ 1.11
Ddx54Q8K4L0 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Ddx54Q8K4L0 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC22.01■■□□□ 1.11
Ddx54Q8K4L0 Grk6-206ENSMUST00000224995 2971 ntBASIC22.01■■□□□ 1.11
Ddx54Q8K4L0 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
Ddx54Q8K4L0 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Ddx54Q8K4L0 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Ddx54Q8K4L0 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC22.01■■□□□ 1.11
Ddx54Q8K4L0 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC22■■□□□ 1.11
Ddx54Q8K4L0 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Ddx54Q8K4L0 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Ddx54Q8K4L0 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC22■■□□□ 1.11
Ddx54Q8K4L0 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC22■■□□□ 1.11
Ddx54Q8K4L0 AC127349.1-201ENSMUST00000224590 266 ntBASIC22■■□□□ 1.11
Ddx54Q8K4L0 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Ddx54Q8K4L0 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
Ddx54Q8K4L0 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Ddx54Q8K4L0 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Ddx54Q8K4L0 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Ddx54Q8K4L0 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC22■■□□□ 1.11
Ddx54Q8K4L0 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC22■■□□□ 1.11
Ddx54Q8K4L0 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Ddx54Q8K4L0 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
Ddx54Q8K4L0 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC22■■□□□ 1.11
Ddx54Q8K4L0 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC21.99■■□□□ 1.11
Ddx54Q8K4L0 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Ddx54Q8K4L0 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Ddx54Q8K4L0 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Ddx54Q8K4L0 Gm8784-201ENSMUST00000222096 1435 ntBASIC21.99■■□□□ 1.11
Ddx54Q8K4L0 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Ddx54Q8K4L0 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC21.99■■□□□ 1.11
Ddx54Q8K4L0 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Ddx54Q8K4L0 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
Ddx54Q8K4L0 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Ddx54Q8K4L0 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
Ddx54Q8K4L0 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Ddx54Q8K4L0 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Ddx54Q8K4L0 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Ddx54Q8K4L0 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Ddx54Q8K4L0 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
Ddx54Q8K4L0 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Ddx54Q8K4L0 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Ddx54Q8K4L0 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Ddx54Q8K4L0 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Ddx54Q8K4L0 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Ddx54Q8K4L0 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Ddx54Q8K4L0 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC21.98■■□□□ 1.11
Ddx54Q8K4L0 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Ddx54Q8K4L0 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Ddx54Q8K4L0 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Ddx54Q8K4L0 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Ddx54Q8K4L0 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Ddx54Q8K4L0 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Ddx54Q8K4L0 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Ddx54Q8K4L0 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Ddx54Q8K4L0 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Ddx54Q8K4L0 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Ddx54Q8K4L0 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Ddx54Q8K4L0 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Ddx54Q8K4L0 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Ddx54Q8K4L0 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Ddx54Q8K4L0 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC21.97■■□□□ 1.11
Ddx54Q8K4L0 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Ddx54Q8K4L0 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
Ddx54Q8K4L0 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Ddx54Q8K4L0 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Ddx54Q8K4L0 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Ddx54Q8K4L0 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Ddx54Q8K4L0 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Ddx54Q8K4L0 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Ddx54Q8K4L0 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Ddx54Q8K4L0 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Ddx54Q8K4L0 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Ddx54Q8K4L0 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC21.96■■□□□ 1.11
Ddx54Q8K4L0 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC21.96■■□□□ 1.11
Ddx54Q8K4L0 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Ddx54Q8K4L0 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC21.96■■□□□ 1.11
Ddx54Q8K4L0 AC154757.1-201ENSMUST00000228289 336 ntBASIC21.96■■□□□ 1.11
Ddx54Q8K4L0 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Ddx54Q8K4L0 Gm37500-201ENSMUST00000192059 1443 ntBASIC21.96■■□□□ 1.11
Ddx54Q8K4L0 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
Ddx54Q8K4L0 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Ddx54Q8K4L0 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Ddx54Q8K4L0 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Ddx54Q8K4L0 Gm4913-201ENSMUST00000117075 1290 ntBASIC21.95■■□□□ 1.1
Ddx54Q8K4L0 H2af-ps-201ENSMUST00000119066 295 ntBASIC21.95■■□□□ 1.1
Ddx54Q8K4L0 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Ddx54Q8K4L0 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
Ddx54Q8K4L0 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC21.95■■□□□ 1.1
Ddx54Q8K4L0 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Ddx54Q8K4L0 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC21.95■■□□□ 1.1
Ddx54Q8K4L0 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Ddx54Q8K4L0 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
Ddx54Q8K4L0 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC21.95■■□□□ 1.1
Ddx54Q8K4L0 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Ddx54Q8K4L0 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC21.95■■□□□ 1.1
Ddx54Q8K4L0 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
Retrieved 100 of 76,532 protein–RNA pairs in 66.1 ms