Protein–RNA interactions for Protein: Q8K4E0

Alms1, Alstrom syndrome protein 1 homolog, mousemouse

Predictions only

Length 3,251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alms1Q8K4E0 Gm10060-201ENSMUST00000212002 111 ntBASIC16.42■□□□□ 0.22
Alms1Q8K4E0 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Alms1Q8K4E0 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Alms1Q8K4E0 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Alms1Q8K4E0 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Alms1Q8K4E0 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC16.42■□□□□ 0.22
Alms1Q8K4E0 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC16.42■□□□□ 0.22
Alms1Q8K4E0 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
Alms1Q8K4E0 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC16.42■□□□□ 0.22
Alms1Q8K4E0 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Alms1Q8K4E0 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Alms1Q8K4E0 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Alms1Q8K4E0 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Alms1Q8K4E0 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC16.41■□□□□ 0.22
Alms1Q8K4E0 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Alms1Q8K4E0 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC16.41■□□□□ 0.22
Alms1Q8K4E0 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Alms1Q8K4E0 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Alms1Q8K4E0 Gm16499-203ENSMUST00000204633 2177 ntBASIC16.41■□□□□ 0.22
Alms1Q8K4E0 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Alms1Q8K4E0 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Alms1Q8K4E0 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Alms1Q8K4E0 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Alms1Q8K4E0 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Alms1Q8K4E0 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Alms1Q8K4E0 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Alms1Q8K4E0 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Alms1Q8K4E0 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Alms1Q8K4E0 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC16.41■□□□□ 0.22
Alms1Q8K4E0 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Alms1Q8K4E0 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC16.41■□□□□ 0.22
Alms1Q8K4E0 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Alms1Q8K4E0 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Alms1Q8K4E0 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC16.41■□□□□ 0.22
Alms1Q8K4E0 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Alms1Q8K4E0 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Alms1Q8K4E0 Gm6190-201ENSMUST00000220683 1374 ntBASIC16.41■□□□□ 0.22
Alms1Q8K4E0 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Alms1Q8K4E0 Gm15372-201ENSMUST00000120729 834 ntBASIC16.41■□□□□ 0.22
Alms1Q8K4E0 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Alms1Q8K4E0 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
Alms1Q8K4E0 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Alms1Q8K4E0 Gm43294-201ENSMUST00000202850 2490 ntBASIC16.4■□□□□ 0.22
Alms1Q8K4E0 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC16.4■□□□□ 0.22
Alms1Q8K4E0 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Alms1Q8K4E0 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Alms1Q8K4E0 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Alms1Q8K4E0 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Alms1Q8K4E0 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Alms1Q8K4E0 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Alms1Q8K4E0 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Alms1Q8K4E0 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Alms1Q8K4E0 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Alms1Q8K4E0 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Alms1Q8K4E0 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Alms1Q8K4E0 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC16.4■□□□□ 0.22
Alms1Q8K4E0 Gm12350-201ENSMUST00000121208 462 ntBASIC16.4■□□□□ 0.22
Alms1Q8K4E0 Gm12895-201ENSMUST00000122214 226 ntBASIC16.4■□□□□ 0.22
Alms1Q8K4E0 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Alms1Q8K4E0 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Alms1Q8K4E0 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Alms1Q8K4E0 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Alms1Q8K4E0 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Alms1Q8K4E0 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Alms1Q8K4E0 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Alms1Q8K4E0 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC16.39■□□□□ 0.21
Alms1Q8K4E0 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Alms1Q8K4E0 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Alms1Q8K4E0 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Alms1Q8K4E0 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Alms1Q8K4E0 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Alms1Q8K4E0 Gm18195-201ENSMUST00000207604 706 ntBASIC16.39■□□□□ 0.21
Alms1Q8K4E0 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Alms1Q8K4E0 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Alms1Q8K4E0 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Alms1Q8K4E0 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Alms1Q8K4E0 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Alms1Q8K4E0 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Alms1Q8K4E0 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Alms1Q8K4E0 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Alms1Q8K4E0 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Alms1Q8K4E0 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Alms1Q8K4E0 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Alms1Q8K4E0 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Alms1Q8K4E0 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Alms1Q8K4E0 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Alms1Q8K4E0 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Alms1Q8K4E0 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Alms1Q8K4E0 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Alms1Q8K4E0 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Alms1Q8K4E0 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Alms1Q8K4E0 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC16.38■□□□□ 0.21
Alms1Q8K4E0 Mir8112-201ENSMUST00000184382 131 ntBASIC16.38■□□□□ 0.21
Alms1Q8K4E0 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Alms1Q8K4E0 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Alms1Q8K4E0 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Alms1Q8K4E0 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Alms1Q8K4E0 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Alms1Q8K4E0 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Alms1Q8K4E0 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms