Protein–RNA interactions for Protein: Q8K353

Cystm1, Cysteine-rich and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cystm1Q8K353 Gm6420-201ENSMUST00000193885 723 ntBASIC10.58□□□□□ -0.72
Cystm1Q8K353 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC10.58□□□□□ -0.72
Cystm1Q8K353 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cystm1Q8K353 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Cystm1Q8K353 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Cystm1Q8K353 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cystm1Q8K353 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Cystm1Q8K353 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC10.58□□□□□ -0.72
Cystm1Q8K353 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC10.58□□□□□ -0.72
Cystm1Q8K353 Gm10584-201ENSMUST00000207036 2628 ntBASIC10.58□□□□□ -0.72
Cystm1Q8K353 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cystm1Q8K353 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cystm1Q8K353 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cystm1Q8K353 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC10.58□□□□□ -0.72
Cystm1Q8K353 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cystm1Q8K353 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC10.58□□□□□ -0.72
Cystm1Q8K353 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cystm1Q8K353 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Cystm1Q8K353 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cystm1Q8K353 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cystm1Q8K353 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Cystm1Q8K353 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cystm1Q8K353 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC10.58□□□□□ -0.72
Cystm1Q8K353 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Cystm1Q8K353 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cystm1Q8K353 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cystm1Q8K353 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cystm1Q8K353 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Cystm1Q8K353 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cystm1Q8K353 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC10.57□□□□□ -0.72
Cystm1Q8K353 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Cystm1Q8K353 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Cystm1Q8K353 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cystm1Q8K353 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cystm1Q8K353 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cystm1Q8K353 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cystm1Q8K353 Gm13148-201ENSMUST00000118892 745 ntBASIC10.57□□□□□ -0.72
Cystm1Q8K353 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cystm1Q8K353 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC10.57□□□□□ -0.72
Cystm1Q8K353 Gm5408-201ENSMUST00000197998 747 ntBASIC10.57□□□□□ -0.72
Cystm1Q8K353 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cystm1Q8K353 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cystm1Q8K353 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Cystm1Q8K353 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cystm1Q8K353 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cystm1Q8K353 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Cystm1Q8K353 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC10.57□□□□□ -0.72
Cystm1Q8K353 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cystm1Q8K353 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cystm1Q8K353 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC10.57□□□□□ -0.72
Cystm1Q8K353 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Cystm1Q8K353 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Cystm1Q8K353 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cystm1Q8K353 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC10.57□□□□□ -0.72
Cystm1Q8K353 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cystm1Q8K353 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cystm1Q8K353 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Cystm1Q8K353 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cystm1Q8K353 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cystm1Q8K353 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC10.57□□□□□ -0.72
Cystm1Q8K353 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cystm1Q8K353 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Cystm1Q8K353 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cystm1Q8K353 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cystm1Q8K353 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Cystm1Q8K353 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cystm1Q8K353 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cystm1Q8K353 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cystm1Q8K353 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC10.56□□□□□ -0.72
Cystm1Q8K353 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cystm1Q8K353 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cystm1Q8K353 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cystm1Q8K353 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC10.56□□□□□ -0.72
Cystm1Q8K353 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Cystm1Q8K353 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC10.56□□□□□ -0.72
Cystm1Q8K353 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cystm1Q8K353 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Cystm1Q8K353 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC10.56□□□□□ -0.72
Cystm1Q8K353 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Cystm1Q8K353 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC10.56□□□□□ -0.72
Cystm1Q8K353 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cystm1Q8K353 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cystm1Q8K353 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cystm1Q8K353 Gm36858-201ENSMUST00000194501 2391 ntBASIC10.56□□□□□ -0.72
Cystm1Q8K353 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC10.56□□□□□ -0.72
Cystm1Q8K353 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cystm1Q8K353 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cystm1Q8K353 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cystm1Q8K353 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cystm1Q8K353 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cystm1Q8K353 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cystm1Q8K353 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Cystm1Q8K353 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cystm1Q8K353 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cystm1Q8K353 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cystm1Q8K353 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC10.56□□□□□ -0.72
Cystm1Q8K353 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cystm1Q8K353 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC10.56□□□□□ -0.72
Cystm1Q8K353 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cystm1Q8K353 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms