Protein–RNA interactions for Protein: Q8JZS7

Hmgcll1, 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcll1Q8JZS7 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.31■□□□□ 0.36
Hmgcll1Q8JZS7 Gfra2-202ENSMUST00000227633 1480 ntBASIC17.31■□□□□ 0.36
Hmgcll1Q8JZS7 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hmgcll1Q8JZS7 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hmgcll1Q8JZS7 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hmgcll1Q8JZS7 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hmgcll1Q8JZS7 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hmgcll1Q8JZS7 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17.3■□□□□ 0.36
Hmgcll1Q8JZS7 Olfr129-201ENSMUST00000122318 993 ntBASIC17.3■□□□□ 0.36
Hmgcll1Q8JZS7 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hmgcll1Q8JZS7 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Hmgcll1Q8JZS7 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.3■□□□□ 0.36
Hmgcll1Q8JZS7 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Hmgcll1Q8JZS7 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Hmgcll1Q8JZS7 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hmgcll1Q8JZS7 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hmgcll1Q8JZS7 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hmgcll1Q8JZS7 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hmgcll1Q8JZS7 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hmgcll1Q8JZS7 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hmgcll1Q8JZS7 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC17.3■□□□□ 0.36
Hmgcll1Q8JZS7 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hmgcll1Q8JZS7 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hmgcll1Q8JZS7 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Hmgcll1Q8JZS7 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Hmgcll1Q8JZS7 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Hmgcll1Q8JZS7 Ighv6-1-201ENSMUST00000193612 343 ntBASIC17.29■□□□□ 0.36
Hmgcll1Q8JZS7 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC17.29■□□□□ 0.36
Hmgcll1Q8JZS7 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hmgcll1Q8JZS7 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hmgcll1Q8JZS7 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Hmgcll1Q8JZS7 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Hmgcll1Q8JZS7 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hmgcll1Q8JZS7 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
Hmgcll1Q8JZS7 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Hmgcll1Q8JZS7 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hmgcll1Q8JZS7 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Hmgcll1Q8JZS7 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hmgcll1Q8JZS7 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hmgcll1Q8JZS7 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hmgcll1Q8JZS7 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hmgcll1Q8JZS7 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hmgcll1Q8JZS7 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC17.28■□□□□ 0.36
Hmgcll1Q8JZS7 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Hmgcll1Q8JZS7 Gm17807-201ENSMUST00000186869 298 ntBASIC17.28■□□□□ 0.36
Hmgcll1Q8JZS7 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hmgcll1Q8JZS7 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
Hmgcll1Q8JZS7 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hmgcll1Q8JZS7 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hmgcll1Q8JZS7 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Hmgcll1Q8JZS7 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Hmgcll1Q8JZS7 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hmgcll1Q8JZS7 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hmgcll1Q8JZS7 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Hmgcll1Q8JZS7 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Hmgcll1Q8JZS7 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Hmgcll1Q8JZS7 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Hmgcll1Q8JZS7 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC17.27■□□□□ 0.36
Hmgcll1Q8JZS7 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Hmgcll1Q8JZS7 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Hmgcll1Q8JZS7 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Hmgcll1Q8JZS7 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Hmgcll1Q8JZS7 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Hmgcll1Q8JZS7 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC17.27■□□□□ 0.36
Hmgcll1Q8JZS7 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Hmgcll1Q8JZS7 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.35
Hmgcll1Q8JZS7 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Hmgcll1Q8JZS7 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Hmgcll1Q8JZS7 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Hmgcll1Q8JZS7 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Hmgcll1Q8JZS7 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Hmgcll1Q8JZS7 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC17.26■□□□□ 0.35
Hmgcll1Q8JZS7 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hmgcll1Q8JZS7 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hmgcll1Q8JZS7 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hmgcll1Q8JZS7 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC17.26■□□□□ 0.35
Hmgcll1Q8JZS7 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC17.26■□□□□ 0.35
Hmgcll1Q8JZS7 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hmgcll1Q8JZS7 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Hmgcll1Q8JZS7 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.26■□□□□ 0.35
Hmgcll1Q8JZS7 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Hmgcll1Q8JZS7 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC17.26■□□□□ 0.35
Hmgcll1Q8JZS7 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hmgcll1Q8JZS7 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Hmgcll1Q8JZS7 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hmgcll1Q8JZS7 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Hmgcll1Q8JZS7 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Hmgcll1Q8JZS7 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hmgcll1Q8JZS7 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Hmgcll1Q8JZS7 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Hmgcll1Q8JZS7 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hmgcll1Q8JZS7 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Hmgcll1Q8JZS7 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Hmgcll1Q8JZS7 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hmgcll1Q8JZS7 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hmgcll1Q8JZS7 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hmgcll1Q8JZS7 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hmgcll1Q8JZS7 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hmgcll1Q8JZS7 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hmgcll1Q8JZS7 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms