Protein–RNA interactions for Protein: Q8CI71

Vps50, Syndetin, mousemouse

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps50Q8CI71 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vps50Q8CI71 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Vps50Q8CI71 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Vps50Q8CI71 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vps50Q8CI71 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Vps50Q8CI71 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
Vps50Q8CI71 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vps50Q8CI71 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vps50Q8CI71 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vps50Q8CI71 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Vps50Q8CI71 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Vps50Q8CI71 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Vps50Q8CI71 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Vps50Q8CI71 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Vps50Q8CI71 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vps50Q8CI71 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vps50Q8CI71 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vps50Q8CI71 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vps50Q8CI71 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
Vps50Q8CI71 Gm11643-201ENSMUST00000119578 864 ntBASIC16.53■□□□□ 0.24
Vps50Q8CI71 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
Vps50Q8CI71 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Vps50Q8CI71 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC16.53■□□□□ 0.24
Vps50Q8CI71 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vps50Q8CI71 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vps50Q8CI71 Gm37292-201ENSMUST00000192062 758 ntBASIC16.53■□□□□ 0.24
Vps50Q8CI71 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC16.53■□□□□ 0.24
Vps50Q8CI71 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
Vps50Q8CI71 AC166341.7-201ENSMUST00000221698 126 ntBASIC16.53■□□□□ 0.24
Vps50Q8CI71 AC158538.1-201ENSMUST00000225870 294 ntBASIC16.53■□□□□ 0.24
Vps50Q8CI71 Odf3b-204ENSMUST00000227834 930 ntBASIC16.53■□□□□ 0.24
Vps50Q8CI71 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Vps50Q8CI71 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Vps50Q8CI71 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vps50Q8CI71 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vps50Q8CI71 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vps50Q8CI71 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vps50Q8CI71 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vps50Q8CI71 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Vps50Q8CI71 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vps50Q8CI71 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vps50Q8CI71 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vps50Q8CI71 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vps50Q8CI71 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vps50Q8CI71 Gm37166-201ENSMUST00000195473 2474 ntBASIC16.53■□□□□ 0.24
Vps50Q8CI71 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Vps50Q8CI71 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Vps50Q8CI71 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Vps50Q8CI71 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Vps50Q8CI71 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC16.52■□□□□ 0.24
Vps50Q8CI71 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Vps50Q8CI71 Krtap5-1-202ENSMUST00000188274 742 ntBASIC16.52■□□□□ 0.24
Vps50Q8CI71 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Vps50Q8CI71 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Vps50Q8CI71 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.23
Vps50Q8CI71 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Vps50Q8CI71 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Vps50Q8CI71 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Vps50Q8CI71 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Vps50Q8CI71 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Vps50Q8CI71 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Vps50Q8CI71 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Vps50Q8CI71 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Vps50Q8CI71 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC16.52■□□□□ 0.23
Vps50Q8CI71 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vps50Q8CI71 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vps50Q8CI71 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vps50Q8CI71 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC16.51■□□□□ 0.23
Vps50Q8CI71 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vps50Q8CI71 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vps50Q8CI71 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vps50Q8CI71 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Vps50Q8CI71 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vps50Q8CI71 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vps50Q8CI71 Gm5417-201ENSMUST00000079706 384 ntBASIC16.51■□□□□ 0.23
Vps50Q8CI71 Gm20628-201ENSMUST00000177363 3215 ntBASIC16.51■□□□□ 0.23
Vps50Q8CI71 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vps50Q8CI71 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC16.51■□□□□ 0.23
Vps50Q8CI71 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vps50Q8CI71 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Vps50Q8CI71 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Vps50Q8CI71 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vps50Q8CI71 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vps50Q8CI71 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vps50Q8CI71 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Vps50Q8CI71 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vps50Q8CI71 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Vps50Q8CI71 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Vps50Q8CI71 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC16.5■□□□□ 0.23
Vps50Q8CI71 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Vps50Q8CI71 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Vps50Q8CI71 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Vps50Q8CI71 AC135963.1-201ENSMUST00000211640 717 ntBASIC16.5■□□□□ 0.23
Vps50Q8CI71 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Vps50Q8CI71 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vps50Q8CI71 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Vps50Q8CI71 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vps50Q8CI71 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC16.5■□□□□ 0.23
Vps50Q8CI71 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vps50Q8CI71 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms