Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Lysmd4Q8CC84 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Lysmd4Q8CC84 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC15.12■□□□□ 0.01
Lysmd4Q8CC84 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Lysmd4Q8CC84 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Lysmd4Q8CC84 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Lysmd4Q8CC84 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC15.12■□□□□ 0.01
Lysmd4Q8CC84 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Lysmd4Q8CC84 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Lysmd4Q8CC84 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Lysmd4Q8CC84 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Lysmd4Q8CC84 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC15.12■□□□□ 0.01
Lysmd4Q8CC84 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Lysmd4Q8CC84 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Lysmd4Q8CC84 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC15.12■□□□□ 0.01
Lysmd4Q8CC84 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC15.11■□□□□ 0.01
Lysmd4Q8CC84 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Lysmd4Q8CC84 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Lysmd4Q8CC84 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Lysmd4Q8CC84 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC15.11■□□□□ 0.01
Lysmd4Q8CC84 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
Lysmd4Q8CC84 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC15.11■□□□□ 0.01
Lysmd4Q8CC84 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Lysmd4Q8CC84 Gm4968-201ENSMUST00000071458 858 ntBASIC15.11■□□□□ 0.01
Lysmd4Q8CC84 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Lysmd4Q8CC84 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Lysmd4Q8CC84 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Lysmd4Q8CC84 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Lysmd4Q8CC84 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Lysmd4Q8CC84 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Lysmd4Q8CC84 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Lysmd4Q8CC84 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Lysmd4Q8CC84 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Lysmd4Q8CC84 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Lysmd4Q8CC84 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Lysmd4Q8CC84 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
Lysmd4Q8CC84 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Lysmd4Q8CC84 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Lysmd4Q8CC84 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Lysmd4Q8CC84 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Lysmd4Q8CC84 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Lysmd4Q8CC84 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Lysmd4Q8CC84 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Lysmd4Q8CC84 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Lysmd4Q8CC84 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Lysmd4Q8CC84 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Lysmd4Q8CC84 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Lysmd4Q8CC84 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC15.1■□□□□ 0.01
Lysmd4Q8CC84 AC122769.4-201ENSMUST00000228166 901 ntBASIC15.1■□□□□ 0.01
Lysmd4Q8CC84 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC15.1■□□□□ 0.01
Lysmd4Q8CC84 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC15.1■□□□□ 0.01
Lysmd4Q8CC84 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Lysmd4Q8CC84 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC15.1■□□□□ 0.01
Lysmd4Q8CC84 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Lysmd4Q8CC84 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Lysmd4Q8CC84 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Lysmd4Q8CC84 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Lysmd4Q8CC84 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Lysmd4Q8CC84 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Lysmd4Q8CC84 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Lysmd4Q8CC84 Dio3-201ENSMUST00000097228 1449 ntBASIC15.09■□□□□ 0.01
Lysmd4Q8CC84 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Lysmd4Q8CC84 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Lysmd4Q8CC84 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
Lysmd4Q8CC84 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC15.09■□□□□ 0.01
Lysmd4Q8CC84 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC15.09■□□□□ 0.01
Lysmd4Q8CC84 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC15.09■□□□□ 0.01
Lysmd4Q8CC84 Gm4974-201ENSMUST00000209974 875 ntBASIC15.09■□□□□ 0.01
Lysmd4Q8CC84 AC163280.1-201ENSMUST00000228194 1100 ntBASIC15.09■□□□□ 0.01
Lysmd4Q8CC84 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Lysmd4Q8CC84 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Lysmd4Q8CC84 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Lysmd4Q8CC84 Gm43072-201ENSMUST00000200283 1671 ntBASIC15.09■□□□□ 0.01
Lysmd4Q8CC84 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC15.09■□□□□ 0.01
Lysmd4Q8CC84 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Lysmd4Q8CC84 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Lysmd4Q8CC84 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Lysmd4Q8CC84 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Lysmd4Q8CC84 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Lysmd4Q8CC84 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Lysmd4Q8CC84 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
Lysmd4Q8CC84 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC15.08■□□□□ 0.01
Lysmd4Q8CC84 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Lysmd4Q8CC84 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Lysmd4Q8CC84 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
Lysmd4Q8CC84 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Lysmd4Q8CC84 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Lysmd4Q8CC84 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC15.08■□□□□ 0
Lysmd4Q8CC84 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Lysmd4Q8CC84 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Lysmd4Q8CC84 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC15.08■□□□□ 0
Lysmd4Q8CC84 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Lysmd4Q8CC84 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Lysmd4Q8CC84 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Lysmd4Q8CC84 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Lysmd4Q8CC84 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Lysmd4Q8CC84 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Lysmd4Q8CC84 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Lysmd4Q8CC84 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Lysmd4Q8CC84 CT010444.2-201ENSMUST00000217877 1629 ntBASIC15.07■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms