Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sh3rf3Q8C120 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sh3rf3Q8C120 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
Sh3rf3Q8C120 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC17.52■□□□□ 0.4
Sh3rf3Q8C120 Gm37166-201ENSMUST00000195473 2474 ntBASIC17.52■□□□□ 0.4
Sh3rf3Q8C120 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sh3rf3Q8C120 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC17.52■□□□□ 0.4
Sh3rf3Q8C120 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Sh3rf3Q8C120 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sh3rf3Q8C120 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sh3rf3Q8C120 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sh3rf3Q8C120 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sh3rf3Q8C120 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sh3rf3Q8C120 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Sh3rf3Q8C120 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sh3rf3Q8C120 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sh3rf3Q8C120 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sh3rf3Q8C120 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sh3rf3Q8C120 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Sh3rf3Q8C120 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sh3rf3Q8C120 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
Sh3rf3Q8C120 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC17.51■□□□□ 0.39
Sh3rf3Q8C120 Gm11539-201ENSMUST00000119837 557 ntBASIC17.51■□□□□ 0.39
Sh3rf3Q8C120 Gm13436-201ENSMUST00000120418 567 ntBASIC17.51■□□□□ 0.39
Sh3rf3Q8C120 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Sh3rf3Q8C120 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC17.51■□□□□ 0.39
Sh3rf3Q8C120 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sh3rf3Q8C120 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Sh3rf3Q8C120 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Sh3rf3Q8C120 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sh3rf3Q8C120 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Sh3rf3Q8C120 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC17.5■□□□□ 0.39
Sh3rf3Q8C120 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Sh3rf3Q8C120 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sh3rf3Q8C120 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sh3rf3Q8C120 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Sh3rf3Q8C120 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sh3rf3Q8C120 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sh3rf3Q8C120 Gm26596-201ENSMUST00000180464 2655 ntBASIC17.5■□□□□ 0.39
Sh3rf3Q8C120 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sh3rf3Q8C120 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sh3rf3Q8C120 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Sh3rf3Q8C120 Gm42918-201ENSMUST00000199249 1580 ntBASIC17.5■□□□□ 0.39
Sh3rf3Q8C120 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sh3rf3Q8C120 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC17.5■□□□□ 0.39
Sh3rf3Q8C120 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Sh3rf3Q8C120 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC17.5■□□□□ 0.39
Sh3rf3Q8C120 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sh3rf3Q8C120 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sh3rf3Q8C120 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Sh3rf3Q8C120 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Sh3rf3Q8C120 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Sh3rf3Q8C120 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sh3rf3Q8C120 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sh3rf3Q8C120 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sh3rf3Q8C120 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sh3rf3Q8C120 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Sh3rf3Q8C120 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Sh3rf3Q8C120 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sh3rf3Q8C120 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sh3rf3Q8C120 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sh3rf3Q8C120 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sh3rf3Q8C120 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Sh3rf3Q8C120 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sh3rf3Q8C120 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC17.49■□□□□ 0.39
Sh3rf3Q8C120 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sh3rf3Q8C120 Gm18958-201ENSMUST00000174258 762 ntBASIC17.49■□□□□ 0.39
Sh3rf3Q8C120 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sh3rf3Q8C120 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sh3rf3Q8C120 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Sh3rf3Q8C120 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sh3rf3Q8C120 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sh3rf3Q8C120 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sh3rf3Q8C120 Wnt10b-204ENSMUST00000226655 1807 ntBASIC17.49■□□□□ 0.39
Sh3rf3Q8C120 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sh3rf3Q8C120 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sh3rf3Q8C120 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Sh3rf3Q8C120 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Sh3rf3Q8C120 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sh3rf3Q8C120 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
Sh3rf3Q8C120 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sh3rf3Q8C120 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sh3rf3Q8C120 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sh3rf3Q8C120 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sh3rf3Q8C120 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
Sh3rf3Q8C120 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sh3rf3Q8C120 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
Sh3rf3Q8C120 Gm27463-201ENSMUST00000183569 57 ntBASIC17.48■□□□□ 0.39
Sh3rf3Q8C120 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC17.48■□□□□ 0.39
Sh3rf3Q8C120 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Sh3rf3Q8C120 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sh3rf3Q8C120 Gm36858-201ENSMUST00000194501 2391 ntBASIC17.48■□□□□ 0.39
Sh3rf3Q8C120 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Sh3rf3Q8C120 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Sh3rf3Q8C120 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sh3rf3Q8C120 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sh3rf3Q8C120 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sh3rf3Q8C120 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sh3rf3Q8C120 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Sh3rf3Q8C120 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms