Protein–RNA interactions for Protein: Q8BMK4

Ckap4, Cytoskeleton-associated protein 4, mousemouse

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4Q8BMK4 Gm10654-201ENSMUST00000098653 1633 ntBASIC15.94■□□□□ 0.14
Ckap4Q8BMK4 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Ckap4Q8BMK4 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC15.93■□□□□ 0.14
Ckap4Q8BMK4 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Ckap4Q8BMK4 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC15.93■□□□□ 0.14
Ckap4Q8BMK4 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ckap4Q8BMK4 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ckap4Q8BMK4 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC15.93■□□□□ 0.14
Ckap4Q8BMK4 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Ckap4Q8BMK4 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC15.93■□□□□ 0.14
Ckap4Q8BMK4 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Ckap4Q8BMK4 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ckap4Q8BMK4 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ckap4Q8BMK4 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ckap4Q8BMK4 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC15.93■□□□□ 0.14
Ckap4Q8BMK4 Gm12382-201ENSMUST00000122005 922 ntBASIC15.93■□□□□ 0.14
Ckap4Q8BMK4 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Ckap4Q8BMK4 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC15.93■□□□□ 0.14
Ckap4Q8BMK4 Spcs1-207ENSMUST00000228767 1008 ntBASIC15.93■□□□□ 0.14
Ckap4Q8BMK4 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC15.93■□□□□ 0.14
Ckap4Q8BMK4 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC15.93■□□□□ 0.14
Ckap4Q8BMK4 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ckap4Q8BMK4 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Ckap4Q8BMK4 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ckap4Q8BMK4 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ckap4Q8BMK4 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC15.93■□□□□ 0.14
Ckap4Q8BMK4 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Ckap4Q8BMK4 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ckap4Q8BMK4 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ckap4Q8BMK4 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Ckap4Q8BMK4 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ckap4Q8BMK4 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Ckap4Q8BMK4 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Ckap4Q8BMK4 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC15.92■□□□□ 0.14
Ckap4Q8BMK4 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Ckap4Q8BMK4 Gm5643-201ENSMUST00000117081 966 ntBASIC15.92■□□□□ 0.14
Ckap4Q8BMK4 Gm10653-202ENSMUST00000139570 835 ntBASIC15.92■□□□□ 0.14
Ckap4Q8BMK4 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Ckap4Q8BMK4 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Ckap4Q8BMK4 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC15.92■□□□□ 0.14
Ckap4Q8BMK4 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ckap4Q8BMK4 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Ckap4Q8BMK4 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ckap4Q8BMK4 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ckap4Q8BMK4 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ckap4Q8BMK4 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Ckap4Q8BMK4 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ckap4Q8BMK4 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ckap4Q8BMK4 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ckap4Q8BMK4 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ckap4Q8BMK4 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Ckap4Q8BMK4 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Ckap4Q8BMK4 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Ckap4Q8BMK4 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ckap4Q8BMK4 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ckap4Q8BMK4 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Ckap4Q8BMK4 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Ckap4Q8BMK4 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ckap4Q8BMK4 Gm8839-201ENSMUST00000121279 1645 ntBASIC15.91■□□□□ 0.14
Ckap4Q8BMK4 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ckap4Q8BMK4 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Ckap4Q8BMK4 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ckap4Q8BMK4 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ckap4Q8BMK4 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ckap4Q8BMK4 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ckap4Q8BMK4 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Ckap4Q8BMK4 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ckap4Q8BMK4 Gm6576-201ENSMUST00000169678 883 ntBASIC15.91■□□□□ 0.14
Ckap4Q8BMK4 Gm8520-201ENSMUST00000186517 868 ntBASIC15.91■□□□□ 0.14
Ckap4Q8BMK4 AC166341.7-201ENSMUST00000221698 126 ntBASIC15.91■□□□□ 0.14
Ckap4Q8BMK4 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ckap4Q8BMK4 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Ckap4Q8BMK4 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ckap4Q8BMK4 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ckap4Q8BMK4 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ckap4Q8BMK4 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Ckap4Q8BMK4 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Ckap4Q8BMK4 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ckap4Q8BMK4 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Ckap4Q8BMK4 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Ckap4Q8BMK4 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC15.91■□□□□ 0.14
Ckap4Q8BMK4 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ckap4Q8BMK4 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Ckap4Q8BMK4 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ckap4Q8BMK4 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ckap4Q8BMK4 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ckap4Q8BMK4 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Ckap4Q8BMK4 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC15.9■□□□□ 0.14
Ckap4Q8BMK4 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Ckap4Q8BMK4 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC15.9■□□□□ 0.14
Ckap4Q8BMK4 Gm42545-201ENSMUST00000202755 922 ntBASIC15.9■□□□□ 0.14
Ckap4Q8BMK4 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC15.9■□□□□ 0.14
Ckap4Q8BMK4 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Ckap4Q8BMK4 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ckap4Q8BMK4 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ckap4Q8BMK4 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
Ckap4Q8BMK4 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ckap4Q8BMK4 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Ckap4Q8BMK4 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ckap4Q8BMK4 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 56.3 ms