Protein–RNA interactions for Protein: Q8BKX6

Smg1, Serine/threonine-protein kinase SMG1, mousemouse

Known RBP Predictions only

Length 3,658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg1Q8BKX6 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Smg1Q8BKX6 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Smg1Q8BKX6 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Smg1Q8BKX6 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Smg1Q8BKX6 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Smg1Q8BKX6 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Smg1Q8BKX6 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Smg1Q8BKX6 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Smg1Q8BKX6 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Smg1Q8BKX6 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Smg1Q8BKX6 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Smg1Q8BKX6 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Smg1Q8BKX6 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Smg1Q8BKX6 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Smg1Q8BKX6 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smg1Q8BKX6 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC14.2□□□□□ -0.14
Smg1Q8BKX6 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Smg1Q8BKX6 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC14.2□□□□□ -0.14
Smg1Q8BKX6 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Smg1Q8BKX6 AC122351.1-201ENSMUST00000220467 126 ntBASIC14.2□□□□□ -0.14
Smg1Q8BKX6 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smg1Q8BKX6 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smg1Q8BKX6 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Smg1Q8BKX6 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smg1Q8BKX6 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smg1Q8BKX6 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smg1Q8BKX6 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC14.2□□□□□ -0.14
Smg1Q8BKX6 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smg1Q8BKX6 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smg1Q8BKX6 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Smg1Q8BKX6 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smg1Q8BKX6 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smg1Q8BKX6 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smg1Q8BKX6 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smg1Q8BKX6 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Smg1Q8BKX6 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC14.2□□□□□ -0.14
Smg1Q8BKX6 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC14.2□□□□□ -0.14
Smg1Q8BKX6 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC14.2□□□□□ -0.14
Smg1Q8BKX6 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smg1Q8BKX6 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Smg1Q8BKX6 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smg1Q8BKX6 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smg1Q8BKX6 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smg1Q8BKX6 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smg1Q8BKX6 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smg1Q8BKX6 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smg1Q8BKX6 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smg1Q8BKX6 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC14.19□□□□□ -0.14
Smg1Q8BKX6 Gm27000-201ENSMUST00000182943 842 ntBASIC14.19□□□□□ -0.14
Smg1Q8BKX6 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Smg1Q8BKX6 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smg1Q8BKX6 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
Smg1Q8BKX6 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Smg1Q8BKX6 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smg1Q8BKX6 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Smg1Q8BKX6 Gm37171-201ENSMUST00000192636 1185 ntBASIC14.19□□□□□ -0.14
Smg1Q8BKX6 AC140375.2-201ENSMUST00000225283 584 ntBASIC14.19□□□□□ -0.14
Smg1Q8BKX6 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smg1Q8BKX6 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smg1Q8BKX6 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smg1Q8BKX6 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Smg1Q8BKX6 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smg1Q8BKX6 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC14.19□□□□□ -0.14
Smg1Q8BKX6 Gm6550-201ENSMUST00000187574 993 ntBASIC14.19□□□□□ -0.14
Smg1Q8BKX6 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Smg1Q8BKX6 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smg1Q8BKX6 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Smg1Q8BKX6 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smg1Q8BKX6 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Smg1Q8BKX6 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smg1Q8BKX6 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smg1Q8BKX6 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Smg1Q8BKX6 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smg1Q8BKX6 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smg1Q8BKX6 Gm11336-201ENSMUST00000118168 334 ntBASIC14.18□□□□□ -0.14
Smg1Q8BKX6 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC14.18□□□□□ -0.14
Smg1Q8BKX6 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC14.18□□□□□ -0.14
Smg1Q8BKX6 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smg1Q8BKX6 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Smg1Q8BKX6 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smg1Q8BKX6 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smg1Q8BKX6 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smg1Q8BKX6 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC14.18□□□□□ -0.14
Smg1Q8BKX6 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC14.18□□□□□ -0.14
Smg1Q8BKX6 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC14.18□□□□□ -0.14
Smg1Q8BKX6 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smg1Q8BKX6 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Smg1Q8BKX6 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smg1Q8BKX6 Gm15590-201ENSMUST00000078419 552 ntBASIC14.18□□□□□ -0.14
Smg1Q8BKX6 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Smg1Q8BKX6 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smg1Q8BKX6 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smg1Q8BKX6 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Smg1Q8BKX6 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smg1Q8BKX6 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Smg1Q8BKX6 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
Smg1Q8BKX6 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smg1Q8BKX6 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smg1Q8BKX6 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smg1Q8BKX6 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms