Protein–RNA interactions for Protein: Q80ZR8

1700001J03Rik, RIKEN cDNA 1700001J03, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
1700001J03RikQ80ZR8 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
1700001J03RikQ80ZR8 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
1700001J03RikQ80ZR8 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
1700001J03RikQ80ZR8 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
1700001J03RikQ80ZR8 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
1700001J03RikQ80ZR8 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
1700001J03RikQ80ZR8 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
1700001J03RikQ80ZR8 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
1700001J03RikQ80ZR8 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
1700001J03RikQ80ZR8 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
1700001J03RikQ80ZR8 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
1700001J03RikQ80ZR8 Gm29340-201ENSMUST00000188763 3854 ntBASIC15.2■□□□□ 0.02
1700001J03RikQ80ZR8 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
1700001J03RikQ80ZR8 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
1700001J03RikQ80ZR8 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
1700001J03RikQ80ZR8 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
1700001J03RikQ80ZR8 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC15.2■□□□□ 0.02
1700001J03RikQ80ZR8 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC15.2■□□□□ 0.02
1700001J03RikQ80ZR8 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
1700001J03RikQ80ZR8 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
1700001J03RikQ80ZR8 Gm36858-201ENSMUST00000194501 2391 ntBASIC15.2■□□□□ 0.02
1700001J03RikQ80ZR8 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
1700001J03RikQ80ZR8 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
1700001J03RikQ80ZR8 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
1700001J03RikQ80ZR8 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
1700001J03RikQ80ZR8 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
1700001J03RikQ80ZR8 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
1700001J03RikQ80ZR8 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
1700001J03RikQ80ZR8 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
1700001J03RikQ80ZR8 AC093043.3-201ENSMUST00000226531 2273 ntBASIC15.19■□□□□ 0.02
1700001J03RikQ80ZR8 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
1700001J03RikQ80ZR8 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
1700001J03RikQ80ZR8 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
1700001J03RikQ80ZR8 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
1700001J03RikQ80ZR8 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
1700001J03RikQ80ZR8 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
1700001J03RikQ80ZR8 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
1700001J03RikQ80ZR8 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
1700001J03RikQ80ZR8 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
1700001J03RikQ80ZR8 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
1700001J03RikQ80ZR8 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
1700001J03RikQ80ZR8 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
1700001J03RikQ80ZR8 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
1700001J03RikQ80ZR8 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
1700001J03RikQ80ZR8 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC15.19■□□□□ 0.02
1700001J03RikQ80ZR8 Wdr70-203ENSMUST00000227371 1130 ntBASIC15.19■□□□□ 0.02
1700001J03RikQ80ZR8 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
1700001J03RikQ80ZR8 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
1700001J03RikQ80ZR8 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
1700001J03RikQ80ZR8 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
1700001J03RikQ80ZR8 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
1700001J03RikQ80ZR8 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
1700001J03RikQ80ZR8 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
1700001J03RikQ80ZR8 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
1700001J03RikQ80ZR8 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
1700001J03RikQ80ZR8 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
1700001J03RikQ80ZR8 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
1700001J03RikQ80ZR8 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
1700001J03RikQ80ZR8 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
1700001J03RikQ80ZR8 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
1700001J03RikQ80ZR8 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
1700001J03RikQ80ZR8 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC15.18■□□□□ 0.02
1700001J03RikQ80ZR8 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
1700001J03RikQ80ZR8 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
1700001J03RikQ80ZR8 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
1700001J03RikQ80ZR8 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
1700001J03RikQ80ZR8 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
1700001J03RikQ80ZR8 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
1700001J03RikQ80ZR8 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
1700001J03RikQ80ZR8 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
1700001J03RikQ80ZR8 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
1700001J03RikQ80ZR8 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
1700001J03RikQ80ZR8 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
1700001J03RikQ80ZR8 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
1700001J03RikQ80ZR8 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
1700001J03RikQ80ZR8 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
1700001J03RikQ80ZR8 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
1700001J03RikQ80ZR8 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
1700001J03RikQ80ZR8 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
1700001J03RikQ80ZR8 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC15.18■□□□□ 0.02
1700001J03RikQ80ZR8 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
1700001J03RikQ80ZR8 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
1700001J03RikQ80ZR8 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
1700001J03RikQ80ZR8 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
1700001J03RikQ80ZR8 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
1700001J03RikQ80ZR8 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC15.17■□□□□ 0.02
1700001J03RikQ80ZR8 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
1700001J03RikQ80ZR8 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
1700001J03RikQ80ZR8 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
1700001J03RikQ80ZR8 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
1700001J03RikQ80ZR8 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
1700001J03RikQ80ZR8 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
1700001J03RikQ80ZR8 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
1700001J03RikQ80ZR8 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
1700001J03RikQ80ZR8 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
1700001J03RikQ80ZR8 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
1700001J03RikQ80ZR8 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
1700001J03RikQ80ZR8 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
1700001J03RikQ80ZR8 Mir7075-201ENSMUST00000184187 82 ntBASIC15.17■□□□□ 0.02
1700001J03RikQ80ZR8 AC140930.3-201ENSMUST00000222935 274 ntBASIC15.17■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 56.4 ms