Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC18.96■□□□□ 0.63
Trnp1Q80ZI1 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Trnp1Q80ZI1 Gm7506-201ENSMUST00000207758 815 ntBASIC18.96■□□□□ 0.63
Trnp1Q80ZI1 AV026068-213ENSMUST00000223675 1171 ntBASIC18.96■□□□□ 0.63
Trnp1Q80ZI1 Grk6-206ENSMUST00000224995 2971 ntBASIC18.96■□□□□ 0.63
Trnp1Q80ZI1 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trnp1Q80ZI1 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trnp1Q80ZI1 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Trnp1Q80ZI1 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trnp1Q80ZI1 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Trnp1Q80ZI1 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC18.96■□□□□ 0.63
Trnp1Q80ZI1 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trnp1Q80ZI1 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trnp1Q80ZI1 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trnp1Q80ZI1 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18.95■□□□□ 0.62
Trnp1Q80ZI1 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trnp1Q80ZI1 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trnp1Q80ZI1 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Trnp1Q80ZI1 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC18.95■□□□□ 0.62
Trnp1Q80ZI1 Gm14140-201ENSMUST00000119999 995 ntBASIC18.95■□□□□ 0.62
Trnp1Q80ZI1 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC18.95■□□□□ 0.62
Trnp1Q80ZI1 Gm24513-201ENSMUST00000174964 138 ntBASIC18.95■□□□□ 0.62
Trnp1Q80ZI1 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC18.95■□□□□ 0.62
Trnp1Q80ZI1 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC18.95■□□□□ 0.62
Trnp1Q80ZI1 Gm43935-201ENSMUST00000203569 1050 ntBASIC18.95■□□□□ 0.62
Trnp1Q80ZI1 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC18.95■□□□□ 0.62
Trnp1Q80ZI1 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trnp1Q80ZI1 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trnp1Q80ZI1 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Trnp1Q80ZI1 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC18.95■□□□□ 0.62
Trnp1Q80ZI1 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trnp1Q80ZI1 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trnp1Q80ZI1 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trnp1Q80ZI1 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trnp1Q80ZI1 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Trnp1Q80ZI1 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trnp1Q80ZI1 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trnp1Q80ZI1 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trnp1Q80ZI1 Gm4995-201ENSMUST00000117247 432 ntBASIC18.94■□□□□ 0.62
Trnp1Q80ZI1 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trnp1Q80ZI1 Gm27397-201ENSMUST00000184997 107 ntBASIC18.94■□□□□ 0.62
Trnp1Q80ZI1 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Trnp1Q80ZI1 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trnp1Q80ZI1 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trnp1Q80ZI1 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Trnp1Q80ZI1 Gfra2-202ENSMUST00000227633 1480 ntBASIC18.94■□□□□ 0.62
Trnp1Q80ZI1 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trnp1Q80ZI1 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC18.94■□□□□ 0.62
Trnp1Q80ZI1 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Trnp1Q80ZI1 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trnp1Q80ZI1 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trnp1Q80ZI1 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trnp1Q80ZI1 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trnp1Q80ZI1 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC18.93■□□□□ 0.62
Trnp1Q80ZI1 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trnp1Q80ZI1 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trnp1Q80ZI1 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Trnp1Q80ZI1 Gm9727-201ENSMUST00000161387 555 ntBASIC18.93■□□□□ 0.62
Trnp1Q80ZI1 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC18.93■□□□□ 0.62
Trnp1Q80ZI1 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC18.93■□□□□ 0.62
Trnp1Q80ZI1 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Trnp1Q80ZI1 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trnp1Q80ZI1 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trnp1Q80ZI1 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trnp1Q80ZI1 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Trnp1Q80ZI1 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trnp1Q80ZI1 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.93■□□□□ 0.62
Trnp1Q80ZI1 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trnp1Q80ZI1 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Trnp1Q80ZI1 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Trnp1Q80ZI1 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trnp1Q80ZI1 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Trnp1Q80ZI1 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trnp1Q80ZI1 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Trnp1Q80ZI1 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
Trnp1Q80ZI1 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
Trnp1Q80ZI1 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC18.92■□□□□ 0.62
Trnp1Q80ZI1 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC18.92■□□□□ 0.62
Trnp1Q80ZI1 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC18.92■□□□□ 0.62
Trnp1Q80ZI1 Gm37584-201ENSMUST00000193595 1290 ntBASIC18.92■□□□□ 0.62
Trnp1Q80ZI1 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trnp1Q80ZI1 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trnp1Q80ZI1 AC225888.1-201ENSMUST00000227184 728 ntBASIC18.92■□□□□ 0.62
Trnp1Q80ZI1 AC114585.2-202ENSMUST00000228094 426 ntBASIC18.92■□□□□ 0.62
Trnp1Q80ZI1 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trnp1Q80ZI1 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Trnp1Q80ZI1 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Trnp1Q80ZI1 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Trnp1Q80ZI1 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Trnp1Q80ZI1 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC18.92■□□□□ 0.62
Trnp1Q80ZI1 Gm15442-201ENSMUST00000117905 1527 ntBASIC18.91■□□□□ 0.62
Trnp1Q80ZI1 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Trnp1Q80ZI1 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Trnp1Q80ZI1 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Trnp1Q80ZI1 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC18.91■□□□□ 0.62
Trnp1Q80ZI1 Gm6550-201ENSMUST00000187574 993 ntBASIC18.91■□□□□ 0.62
Trnp1Q80ZI1 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC18.91■□□□□ 0.62
Trnp1Q80ZI1 Gm6089-201ENSMUST00000197666 938 ntBASIC18.91■□□□□ 0.62
Trnp1Q80ZI1 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trnp1Q80ZI1 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 11.5 ms