Protein–RNA interactions for Protein: Q80V85

Trim62, E3 ubiquitin-protein ligase TRIM62, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim62Q80V85 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC17.41■□□□□ 0.38
Trim62Q80V85 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim62Q80V85 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim62Q80V85 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trim62Q80V85 Gm42900-201ENSMUST00000197184 2167 ntBASIC17.41■□□□□ 0.38
Trim62Q80V85 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC17.41■□□□□ 0.38
Trim62Q80V85 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC17.41■□□□□ 0.38
Trim62Q80V85 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim62Q80V85 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim62Q80V85 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC17.41■□□□□ 0.38
Trim62Q80V85 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim62Q80V85 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trim62Q80V85 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim62Q80V85 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim62Q80V85 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim62Q80V85 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim62Q80V85 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim62Q80V85 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Trim62Q80V85 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim62Q80V85 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim62Q80V85 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim62Q80V85 Gm9013-201ENSMUST00000132939 882 ntBASIC17.4■□□□□ 0.38
Trim62Q80V85 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC17.4■□□□□ 0.38
Trim62Q80V85 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Trim62Q80V85 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Trim62Q80V85 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim62Q80V85 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim62Q80V85 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim62Q80V85 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
Trim62Q80V85 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim62Q80V85 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Trim62Q80V85 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC17.4■□□□□ 0.38
Trim62Q80V85 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim62Q80V85 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim62Q80V85 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim62Q80V85 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Trim62Q80V85 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim62Q80V85 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC17.4■□□□□ 0.38
Trim62Q80V85 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Trim62Q80V85 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim62Q80V85 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Trim62Q80V85 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim62Q80V85 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim62Q80V85 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Trim62Q80V85 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim62Q80V85 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Trim62Q80V85 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Trim62Q80V85 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim62Q80V85 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Trim62Q80V85 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Trim62Q80V85 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim62Q80V85 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Trim62Q80V85 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC17.39■□□□□ 0.37
Trim62Q80V85 Gm3272-201ENSMUST00000181181 1229 ntBASIC17.39■□□□□ 0.37
Trim62Q80V85 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
Trim62Q80V85 Gm10566-201ENSMUST00000086739 996 ntBASIC17.39■□□□□ 0.37
Trim62Q80V85 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim62Q80V85 Gm6598-201ENSMUST00000202719 2615 ntBASIC17.39■□□□□ 0.37
Trim62Q80V85 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Trim62Q80V85 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Trim62Q80V85 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim62Q80V85 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim62Q80V85 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Trim62Q80V85 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC17.39■□□□□ 0.37
Trim62Q80V85 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim62Q80V85 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim62Q80V85 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim62Q80V85 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim62Q80V85 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Trim62Q80V85 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim62Q80V85 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Trim62Q80V85 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC17.38■□□□□ 0.37
Trim62Q80V85 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim62Q80V85 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
Trim62Q80V85 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Trim62Q80V85 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC17.38■□□□□ 0.37
Trim62Q80V85 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim62Q80V85 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC17.38■□□□□ 0.37
Trim62Q80V85 Gm25016-201ENSMUST00000158399 131 ntBASIC17.38■□□□□ 0.37
Trim62Q80V85 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
Trim62Q80V85 Gm6659-201ENSMUST00000174752 547 ntBASIC17.38■□□□□ 0.37
Trim62Q80V85 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Trim62Q80V85 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim62Q80V85 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Trim62Q80V85 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim62Q80V85 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Trim62Q80V85 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Trim62Q80V85 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Trim62Q80V85 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Trim62Q80V85 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim62Q80V85 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim62Q80V85 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC17.38■□□□□ 0.37
Trim62Q80V85 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim62Q80V85 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim62Q80V85 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim62Q80V85 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim62Q80V85 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Trim62Q80V85 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim62Q80V85 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim62Q80V85 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms