Protein–RNA interactions for Protein: Q80U87

Usp8, Ubiquitin carboxyl-terminal hydrolase 8, mousemouse

Predictions only

Length 1,080 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp8Q80U87 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC16.89■□□□□ 0.29
Usp8Q80U87 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC16.89■□□□□ 0.29
Usp8Q80U87 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Usp8Q80U87 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Usp8Q80U87 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Usp8Q80U87 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Usp8Q80U87 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Usp8Q80U87 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Usp8Q80U87 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Usp8Q80U87 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Usp8Q80U87 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Usp8Q80U87 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Usp8Q80U87 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Usp8Q80U87 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC16.89■□□□□ 0.29
Usp8Q80U87 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Usp8Q80U87 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Usp8Q80U87 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Usp8Q80U87 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Usp8Q80U87 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Usp8Q80U87 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Usp8Q80U87 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Usp8Q80U87 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Usp8Q80U87 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Usp8Q80U87 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Usp8Q80U87 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Usp8Q80U87 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC16.88■□□□□ 0.29
Usp8Q80U87 CT025689.6-201ENSMUST00000224991 1104 ntBASIC16.88■□□□□ 0.29
Usp8Q80U87 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Usp8Q80U87 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Usp8Q80U87 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Usp8Q80U87 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Usp8Q80U87 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Usp8Q80U87 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC16.88■□□□□ 0.29
Usp8Q80U87 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Usp8Q80U87 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Usp8Q80U87 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Usp8Q80U87 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC16.87■□□□□ 0.29
Usp8Q80U87 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Usp8Q80U87 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Usp8Q80U87 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Usp8Q80U87 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Usp8Q80U87 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Usp8Q80U87 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Usp8Q80U87 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Usp8Q80U87 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Usp8Q80U87 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Usp8Q80U87 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC16.87■□□□□ 0.29
Usp8Q80U87 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC16.87■□□□□ 0.29
Usp8Q80U87 Gm5643-201ENSMUST00000117081 966 ntBASIC16.87■□□□□ 0.29
Usp8Q80U87 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Usp8Q80U87 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC16.87■□□□□ 0.29
Usp8Q80U87 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Usp8Q80U87 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Usp8Q80U87 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Usp8Q80U87 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Usp8Q80U87 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Usp8Q80U87 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Usp8Q80U87 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC16.87■□□□□ 0.29
Usp8Q80U87 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Usp8Q80U87 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Usp8Q80U87 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Usp8Q80U87 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Usp8Q80U87 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC16.86■□□□□ 0.29
Usp8Q80U87 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC16.86■□□□□ 0.29
Usp8Q80U87 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC16.86■□□□□ 0.29
Usp8Q80U87 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC16.86■□□□□ 0.29
Usp8Q80U87 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Usp8Q80U87 Gm29257-201ENSMUST00000186115 639 ntBASIC16.86■□□□□ 0.29
Usp8Q80U87 Gm9867-201ENSMUST00000192212 2647 ntBASIC16.86■□□□□ 0.29
Usp8Q80U87 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Usp8Q80U87 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Usp8Q80U87 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Usp8Q80U87 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Usp8Q80U87 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Usp8Q80U87 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Usp8Q80U87 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Usp8Q80U87 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Usp8Q80U87 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Usp8Q80U87 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Usp8Q80U87 Gm15378-201ENSMUST00000121894 207 ntBASIC16.85■□□□□ 0.29
Usp8Q80U87 Gm43183-201ENSMUST00000200632 547 ntBASIC16.85■□□□□ 0.29
Usp8Q80U87 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Usp8Q80U87 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC16.85■□□□□ 0.29
Usp8Q80U87 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Usp8Q80U87 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Usp8Q80U87 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Usp8Q80U87 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Usp8Q80U87 Gm37812-201ENSMUST00000195216 2475 ntBASIC16.85■□□□□ 0.29
Usp8Q80U87 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Usp8Q80U87 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Usp8Q80U87 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Usp8Q80U87 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Usp8Q80U87 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC16.84■□□□□ 0.29
Usp8Q80U87 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC16.84■□□□□ 0.29
Usp8Q80U87 Gm10517-202ENSMUST00000192970 758 ntBASIC16.84■□□□□ 0.29
Usp8Q80U87 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC16.84■□□□□ 0.29
Usp8Q80U87 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Usp8Q80U87 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Usp8Q80U87 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Usp8Q80U87 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms